Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P23970_001 | Banana | nucleus | 49.12 | 54.15 |
| GSMUA_Achr10P... | Banana | nucleus | 54.42 | 44.24 |
| GSMUA_Achr11P... | Banana | nucleus | 42.92 | 40.93 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 46.9 | 40.46 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 29.65 | 39.65 |
| KRH74367 | Soybean | nucleus | 45.58 | 37.32 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 44.25 | 37.17 |
| CDX84102 | Canola | nucleus | 43.36 | 36.16 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 34.96 | 36.07 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 35.4 | 35.71 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 14.16 | 35.56 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.85 | 33.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.02 | 33.23 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 15.93 | 33.03 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 53.98 | 32.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.67 | 32.16 |
| GSMUA_Achr10P... | Banana | nucleus | 28.76 | 31.1 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 55.75 | 30.51 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 32.74 | 29.48 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 34.96 | 28.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.15 | 28.62 |
| Bra023254.1-P | Field mustard | nucleus | 46.02 | 28.42 |
| KRH39575 | Soybean | nucleus | 47.35 | 27.44 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 32.74 | 27.21 |
| AT1G32240.1 | Thale cress | nucleus | 46.46 | 27.06 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 44.25 | 26.53 |
| Bra033844.1-P | Field mustard | nucleus | 45.13 | 26.02 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 40.27 | 25.71 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 39.82 | 25.35 |
| KRG97985 | Soybean | nucleus | 46.02 | 21.85 |
| PGSC0003DMT400034663 | Potato | nucleus | 43.36 | 21.78 |
| Solyc11g011770.1.1 | Tomato | nucleus | 43.36 | 21.21 |
| KRH30907 | Soybean | nucleus | 46.46 | 20.79 |
| GSMUA_Achr11P... | Banana | nucleus | 19.47 | 18.8 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 16.37 | 17.96 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 20.35 | 15.75 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 19.91 | 15.73 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 16.81 | 15.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.91 | 15.25 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 21.24 | 14.46 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 21.24 | 12.7 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 21.68 | 11.95 |
| GSMUA_Achr10P... | Banana | nucleus | 23.45 | 10.23 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G23320_001 |
| EnsemblPlants:GSMUA_Achr9P23320_001 | EnsemblPlants:GSMUA_Achr9T23320_001 | InterPro:Homeobox-like_sf | UniProt:M0U2U1 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0002950099 | SEG:seg |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr9G23320_001]
Coordinates
chr9:-:28187224..28190438
Molecular Weight (calculated)
26003.6 Da
IEP (calculated)
9.844
GRAVY (calculated)
-0.839
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIFPSQPDL SLRISPPNTK PISDWRKQDG DTELGGVPVY QQPPSFPLLP PDHHHHHHHH QQQQHLYESS SSTDFDRSAP TQSLSRSSNS PSRIPIKRRM
101: RAPRMRWTTT LHGCFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQKFFRLTSS KFMNMYRTVK NTQRPTVASG RSDGFQNEWS AEISDERLLK
201: IHDLHTSEFS THHEINQIGL WNSSSR
101: RAPRMRWTTT LHGCFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQKFFRLTSS KFMNMYRTVK NTQRPTVASG RSDGFQNEWS AEISDERLLK
201: IHDLHTSEFS THHEINQIGL WNSSSR
001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEVRY IPFYKYNYIY ANMFCV
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEVRY IPFYKYNYIY ANMFCV
Arabidopsis Description
KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.