Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P22100_001 | Banana | nucleus | 56.21 | 43.38 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 22.49 | 42.22 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 23.08 | 35.78 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 42.01 | 34.63 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 45.56 | 34.38 |
| GSMUA_Achr11P... | Banana | nucleus | 46.75 | 33.33 |
| GSMUA_Achr10P... | Banana | nucleus | 39.65 | 32.06 |
| PGSC0003DMT400038366 | Potato | nucleus | 48.52 | 31.78 |
| Solyc08g076400.2.1 | Tomato | nucleus | 48.52 | 31.18 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 65.09 | 30.99 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 48.52 | 30.48 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 39.65 | 29.65 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 44.97 | 29.01 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 42.6 | 28.69 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 46.15 | 28.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.03 | 28.62 |
| GSMUA_Achr10P... | Banana | nucleus | 46.15 | 28.06 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 44.38 | 27.17 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 55.03 | 24.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.38 | 23.96 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 49.7 | 23.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.38 | 21.93 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 49.7 | 20.34 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 44.38 | 20.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.38 | 18.94 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 23.08 | 18.93 |
| GSMUA_Achr11P... | Banana | nucleus | 24.26 | 17.52 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 23.08 | 15.73 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 25.44 | 15.04 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 24.85 | 14.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.26 | 13.9 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 26.63 | 13.55 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 29.59 | 13.23 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 28.99 | 11.95 |
| GSMUA_Achr10P... | Banana | nucleus | 29.59 | 9.65 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr2G06700_001 |
| EnsemblPlants:GSMUA_Achr2P06700_001 | EnsemblPlants:GSMUA_Achr2T06700_001 | InterPro:Homeobox-like_sf | UniProt:M0S5R1 | InterPro:Myb_dom_plants | PFAM:PF00249 |
| PANTHER:PTHR31496 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00029536AF | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G06700_001]
Coordinates
chr2:-:11428060..11429458
Molecular Weight (calculated)
18343.0 Da
IEP (calculated)
9.058
GRAVY (calculated)
-0.134
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSQGVFTDA IASTGSPDLS LHIGPPSIIT AATSAVDGGF RACVDLPLSS IMCPSEAQEP LRPVDDSSRT VNGTPTRFIP RYQTKRSTRA PRMRWTSSLH
101: ARFVHAVDLL GGHERATPKS ILELMNVKDL TLAHVKSHLQ MYRTIKSTDK TAASSGNLCC FASCVYFVH
101: ARFVHAVDLL GGHERATPKS ILELMNVKDL TLAHVKSHLQ MYRTIKSTDK TAASSGNLCC FASCVYFVH
001: MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEVRY IPFYKYNYIY ANMFCV
101: LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR
201: FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD
301: MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEVRY IPFYKYNYIY ANMFCV
Arabidopsis Description
KAN2Probable transcription factor KAN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C616]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.