Factsheet for GSMUA_Achr7P13880_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P00310_001	Banana	nucleus	9.51	43.33
VIT_12s0028g02080.t01	Wine grape	nucleus	23.9	40.5
GSMUA_Achr9P30700_001	Banana	mitochondrion	10.49	39.45
GSMUA_Achr10P...	Banana	nucleus	45.61	36.1
GSMUA_Achr7P09370_001	Banana	nucleus	32.68	35.45
PGSC0003DMT400011207	Potato	nucleus	20.0	34.6
KRH11029	Soybean	nucleus	27.8	31.23
KRH21258	Soybean	nucleus	27.8	30.56
AT2G42660.1	Thale cress	nucleus	18.78	30.2
GSMUA_Achr4P25920_001	Banana	nucleus	18.05	29.84
Solyc03g006150.2.1	Tomato	extracellular, nucleus	21.95	29.32
GSMUA_Achr2P06700_001	Banana	cytosol, nucleus, plastid	11.95	28.99
GSMUA_Achr11P...	Banana	nucleus	16.34	28.63
GSMUA_AchrUn_...	Banana	nucleus	20.49	28.47
PGSC0003DMT400026419	Potato	nucleus	23.66	27.87
GSMUA_Achr5P19200_001	Banana	nucleus	18.78	26.92
Solyc02g076670.2.1	Tomato	nucleus	22.2	26.92
KRH27060	Soybean	nucleus	24.15	26.9
KRH22274	Soybean	nucleus	23.66	26.29
GSMUA_Achr7P22410_001	Banana	nucleus	21.22	26.2
KRH58975	Soybean	nucleus	25.12	25.69
KRH42874	Soybean	nucleus	25.12	25.62
GSMUA_Achr1P23970_001	Banana	nucleus	12.68	25.37
GSMUA_Achr11P...	Banana	nucleus	13.66	23.63
CDY67147	Canola	nucleus	18.54	23.24
GSMUA_Achr7P00680_001	Banana	cytosol, golgi, nucleus	12.68	23.21
CDY42825	Canola	nucleus	18.29	22.94
GSMUA_Achr9P23320_001	Banana	nucleus	11.95	21.68
GSMUA_Achr1P22100_001	Banana	nucleus	11.46	21.46
GSMUA_Achr7P03510_001	Banana	nucleus	10.73	21.36
GSMUA_Achr10P...	Banana	nucleus	14.39	21.22
GSMUA_Achr2P18070_001	Banana	nucleus	13.9	21.19
GSMUA_Achr10P...	Banana	nucleus	10.73	21.05
GSMUA_Achr2P11010_001	Banana	nucleus	14.88	20.89
GSMUA_Achr4P32400_001	Banana	plastid	12.44	20.32
GSMUA_Achr3P00380_001	Banana	nucleus	12.2	19.08
GSMUA_Achr2P13320_001	Banana	nucleus, plastid	12.68	18.84
GSMUA_Achr4P23160_001	Banana	nucleus, plastid	12.2	18.38
GSMUA_AchrUn_...	Banana	nucleus	13.9	18.21
GSMUA_AchrUn_...	Banana	nucleus	14.39	18.15
GSMUA_AchrUn_...	Banana	nucleus	14.63	17.54
GSMUA_Achr7P02420_001	Banana	nucleus	14.63	16.95
Bra000270.1-P	Field mustard	nucleus	11.22	15.97
GSMUA_Achr8P22900_001	Banana	nucleus	14.63	15.92
GSMUA_Achr1P06280_001	Banana	mitochondrion, nucleus	15.61	15.5
GSMUA_Achr4P04510_001	Banana	nucleus	13.9	15.2
GSMUA_AchrUn_...	Banana	nucleus	14.63	15.15
GSMUA_Achr8P30770_001	Banana	nucleus	12.68	14.65

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G13880_001
EnsemblPlants:GSMUA_Achr7P13880_001	EnsemblPlants:GSMUA_Achr7T13880_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0THC5	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314	PANTHER:PTHR31314:SF42	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000295D552	SEG:seg	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G13880_001]

Coordinates

chr7:+:11131842..11133701

Molecular Weight (calculated)

45869.3 Da

IEP (calculated)

6.595

GRAVY (calculated)

-0.871

Length

410 amino acids

Sequence
(BLAST)

001: MGEEGEVVVI CEAEDNCEGR STGSNRSPSR KRGLQELDLN EDLMTEGSDE EEEEGSDDDD GGSTTEVAGG GSSSNNSSTN INNDGNSNIN EGGNTAEGSS
101: ERVASVRQYN RSKTPRLRWT PDLHLSFVHA VERLGGQDRA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK LDDSGKEKSI ISSVLSPMDL HLRRGDRLHE
201: MLYHRTASYQ PFRMENGGYF ASRSMHGPDR LYNLLQPPQY QQPLELKPSR LGYLQNRLHE WTFNQQRATR DGYFNERGPA KGSLHDMILN KEGKAFTSRW
301: FDVRDTVTGK GNPRTENQLL DQRNGAQTME IGSRIGSFDW IGSSTRPLVK GVPVNPVSTG SVVACAGSSN DYNKSRSNLY DPFVINSTKH QFDDPFRLEV
401: VFFDPSMPRK

Best Arabidopsis Sequence Match ( AT2G38300.1 )
(BLAST)

001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL

Arabidopsis Description

Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.