Factsheet for Os02t0241200-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G098200.1	Wheat	nucleus	54.13	62.11
TraesCS6A01G109700.1	Wheat	nucleus	54.31	62.05
HORVU6Hr1G019650.5	Barley	nucleus	53.39	60.62
TraesCS6B01G138200.1	Wheat	nucleus	54.86	56.63
EES04827	Sorghum	nucleus	47.34	48.59
Zm00001d016175_P001	Maize	nucleus	46.42	46.85
VIT_12s0028g02080.t01	Wine grape	nucleus	17.43	39.26
Os06t0543200-01	Rice	nucleus	38.9	39.04
Os11t0106100-00	Rice	nucleus	13.58	34.74
PGSC0003DMT400011207	Potato	nucleus	14.31	32.91
GSMUA_Achr7P09370_001	Banana	nucleus	22.39	32.28
Solyc03g006150.2.1	Tomato	extracellular, nucleus	17.8	31.6
AT2G42660.1	Thale cress	nucleus	14.31	30.59
KRH11029	Soybean	nucleus	19.45	29.04
Os12t0105600-01	Rice	nucleus	16.33	28.34
KRH21258	Soybean	nucleus	18.9	27.61
CDY42825	Canola	nucleus	16.51	27.52
CDY67147	Canola	nucleus	16.51	27.52
KRH27060	Soybean	nucleus	18.53	27.45
Solyc02g076670.2.1	Tomato	nucleus	16.33	26.33
KRH22274	Soybean	nucleus	17.8	26.29
PGSC0003DMT400026419	Potato	nucleus	16.7	26.15
Os06t0670300-01	Rice	nucleus	11.74	25.0
KRH58975	Soybean	nucleus	18.17	24.69
KRH42874	Soybean	nucleus	18.17	24.63
Os04t0566600-01	Rice	extracellular	13.76	24.51
Bra000270.1-P	Field mustard	nucleus	11.38	21.53
Os03t0624000-00	Rice	nucleus	6.24	18.68
Os03t0766500-01	Rice	mitochondrion	12.66	17.6
Os09t0395300-01	Rice	nucleus	10.83	15.65
Os08t0160300-00	Rice	nucleus	9.72	15.36
Os02t0696900-00	Rice	plasma membrane	9.72	14.36
Os08t0426866-00	Rice	nucleus	11.74	13.68
Os12t0591600-01	Rice	nucleus	2.57	7.0

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:107275964	MapMan:35.1	ProteinID:BAD28879.1	ProteinID:BAS77839.1	ProteinID:EAZ22376.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	EnsemblPlantsGene:Os02g0241200	EnsemblPlants:Os02t0241200-00	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31314
PANTHER:PTHR31314:SF20	UniProt:Q6ER41	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00003CE824
RefSeq:XP_015625548.1	SEG:seg	:	:	:	:

Description

Myb-like DNA-binding domain, SHAQKYF class domain containing protein. (Os02t0241200-00)

Coordinates

chr2:+:7986053..7988630

Molecular Weight (calculated)

58910.4 Da

IEP (calculated)

6.253

GRAVY (calculated)

-0.760

Length

545 amino acids

Sequence
(BLAST)

001: MKEKEVLVEI VEDDELKRSI GRNQLDLNEE VMDVESEEGE VGDDEDDEDE EDDDDDDDGG STTDVAGSRS SSNNSSTNNV SESKLKGDKD SGGGRLEGIN
101: GGEQRVPSVR QYNRSKLPRL RWTPDLHMAF VHAVERLGGQ ERATPKLVLQ MMNVRGLSIA HVKSHLQMYR SKKLDHEGRQ IRGAIASVFS PMDFHLMRGD
201: RRFHDMLLQR AAALSSSRQE HGGFFSSRSG GGGGGLPPEA SRLYGLLQHR QSPAIATMQT LDFKNSSFRN QEWSFSFNHQ RKETMNPSSS SSTTAAIRRW
301: PSAAGAVAVV AGERQRLAER FGYYTGNGGA SSTSLPLITR AAMAAPPPMF AAAVAPPGRD HHRLPFGWHA GGGGGGGGNK NRSSSDPVVI DEALDSRRLE
401: HQQKHVEQPR MTPTTTTTPA GKRPPEWSPP DLQLTLSPTT APAAADGGGA KRSKTSTTTT NTTAAISGEQ EAEKNMDRCK NKLSISLSLS PPAAAAAAAN
501: FSSMDLSMEQ QKQKQEKTTI GSSEEEAGDL GQSTLDLTMS IRALE

Best Arabidopsis Sequence Match ( AT2G38300.1 )
(BLAST)

001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL

Arabidopsis Description

Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.