Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0058g00250.t01 | Wine grape | nucleus | 26.76 | 49.14 |
| Solyc09g005030.1.1 | Tomato | nucleus | 30.52 | 44.52 |
| VIT_06s0004g07000.t01 | Wine grape | nucleus | 30.99 | 37.29 |
| TraesCS5A01G153000.1 | Wheat | nucleus | 41.31 | 26.99 |
| TraesCS5D01G158300.1 | Wheat | nucleus | 40.85 | 26.85 |
| TraesCS4D01G131500.1 | Wheat | nucleus | 42.72 | 26.69 |
| TraesCS4A01G180900.1 | Wheat | nucleus | 42.25 | 26.39 |
| Solyc06g051060.2.1 | Tomato | nucleus | 31.46 | 26.38 |
| Os12t0105600-01 | Rice | nucleus | 38.5 | 26.11 |
| TraesCS5B01G151800.1 | Wheat | nucleus | 41.31 | 26.11 |
| Zm00001d005087_P001 | Maize | nucleus | 42.25 | 25.86 |
| Solyc10g076460.1.1 | Tomato | nucleus | 35.68 | 25.17 |
| PGSC0003DMT400041071 | Potato | nucleus | 35.21 | 24.83 |
| TraesCS4B01G136900.1 | Wheat | nucleus | 39.44 | 24.78 |
| EES09087 | Sorghum | nucleus | 40.85 | 23.97 |
| EES15503 | Sorghum | nucleus | 40.85 | 23.77 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 36.62 | 23.49 |
| PGSC0003DMT400068508 | Potato | nucleus | 34.74 | 22.63 |
| PGSC0003DMT400077217 | Potato | nucleus | 37.56 | 21.0 |
| KRH75999 | Soybean | nucleus | 33.8 | 20.99 |
| CDY52431 | Canola | nucleus | 37.09 | 20.31 |
| Bra000180.1-P | Field mustard | nucleus | 36.62 | 20.05 |
| KRH65638 | Soybean | nucleus | 32.39 | 19.94 |
| Os04t0566600-01 | Rice | extracellular | 28.64 | 19.93 |
| CDY07612 | Canola | nucleus | 36.62 | 19.9 |
| Os06t0670300-01 | Rice | nucleus | 23.47 | 19.53 |
| KRH49433 | Soybean | nucleus | 33.33 | 19.4 |
| CDX74803 | Canola | nucleus | 34.74 | 19.27 |
| CDY07070 | Canola | nucleus | 37.56 | 19.23 |
| AT2G40260.1 | Thale cress | nucleus | 36.62 | 19.02 |
| KRH00305 | Soybean | nucleus | 32.86 | 18.97 |
| Os03t0624000-00 | Rice | nucleus | 15.96 | 18.68 |
| CDX93206 | Canola | nucleus | 36.15 | 18.42 |
| CDY18860 | Canola | nucleus | 34.74 | 18.18 |
| Bra004973.1-P | Field mustard | nucleus | 34.74 | 18.18 |
| VIT_13s0067g01500.t01 | Wine grape | extracellular, vacuole | 36.62 | 16.63 |
| Os06t0543200-01 | Rice | nucleus | 37.09 | 14.55 |
| Os08t0160300-00 | Rice | nucleus | 23.0 | 14.2 |
| Os02t0241200-00 | Rice | nucleus | 34.74 | 13.58 |
| Os09t0395300-01 | Rice | nucleus | 23.47 | 13.26 |
| Os03t0766500-01 | Rice | mitochondrion | 23.0 | 12.5 |
| Os08t0426866-00 | Rice | nucleus | 26.29 | 11.97 |
| Os02t0696900-00 | Rice | plasma membrane | 20.19 | 11.65 |
| Bra017021.1-P | Field mustard | nucleus | 14.08 | 8.24 |
| Os12t0591600-01 | Rice | nucleus | 5.16 | 5.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | UniProt:A0A0P0XY89 | ProteinID:BAT12313.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| EnsemblPlantsGene:Os11g0106100 | EnsemblPlants:Os11t0106100-00 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF2 |
| InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000393BCDD | SEG:seg | : |
Description
Similar to Myb-like DNA-binding domain, SHAQKYF class family protein, expressed. (Os11t0106100-00)
Coordinates
chr11:-:281458..283380
Molecular Weight (calculated)
22846.5 Da
IEP (calculated)
8.649
GRAVY (calculated)
-0.310
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAGKEEEE EDGGGGAPAA AANNYGSSTT SSTTEEEGSG ESRRRTSSSS SVRPYVRSKN PRLRWTPELH LSFVRAVDRL GGQDRATPKL VLQLMNVRGL
101: SIGHVKSHLQ MYRSKKIDES GQDQMIICKC KVVAMGDKRT TLAIFPCLLS IIALSLLAPV PSSSPGLAIH GPHGDVMDHT GSLQAITCLL DQNPITHQQL
201: KLKLLSADQV LGM
101: SIGHVKSHLQ MYRSKKIDES GQDQMIICKC KVVAMGDKRT TLAIFPCLLS IIALSLLAPV PSSSPGLAIH GPHGDVMDHT GSLQAITCLL DQNPITHQQL
201: KLKLLSADQV LGM
001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
Arabidopsis Description
Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.