Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67252 | Canola | nucleus | 83.87 | 85.79 |
| CDX69443 | Canola | nucleus | 83.13 | 85.24 |
| CDY38105 | Canola | nucleus | 82.63 | 83.67 |
| CDX85500 | Canola | nucleus | 81.89 | 82.71 |
| Bra008613.1-P | Field mustard | nucleus | 58.06 | 80.41 |
| CDY28659 | Canola | nucleus | 59.8 | 79.02 |
| Bra023570.1-P | Field mustard | cytosol | 64.02 | 64.82 |
| Solyc06g066340.2.1 | Tomato | nucleus | 29.28 | 40.55 |
| VIT_04s0043g00340.t01 | Wine grape | nucleus | 45.91 | 39.61 |
| AT5G42630.1 | Thale cress | nucleus | 26.05 | 38.04 |
| PGSC0003DMT400043200 | Potato | nucleus | 34.74 | 35.18 |
| AT4G04555.1 | Thale cress | mitochondrion | 9.18 | 34.91 |
| AT1G32240.1 | Thale cress | nucleus | 33.25 | 34.54 |
| AT4G17695.1 | Thale cress | nucleus | 26.05 | 32.61 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 30.27 | 32.53 |
| Os08t0426866-00 | Rice | nucleus | 37.22 | 32.05 |
| KRH39002 | Soybean | nucleus | 32.75 | 32.04 |
| KXG25180 | Sorghum | nucleus | 37.22 | 31.58 |
| KRH48713 | Soybean | nucleus | 32.51 | 31.49 |
| Zm00001d032249_P002 | Maize | plastid | 34.74 | 29.05 |
| AT4G04580.1 | Thale cress | nucleus | 10.42 | 25.3 |
| AT4G04605.1 | Thale cress | mitochondrion | 12.9 | 23.64 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 13.15 | 20.7 |
| AT2G42660.1 | Thale cress | nucleus | 12.41 | 19.61 |
| AT1G14600.1 | Thale cress | nucleus | 12.16 | 19.22 |
| AT2G38300.1 | Thale cress | nucleus | 12.66 | 15.0 |
| AT2G40260.1 | Thale cress | nucleus | 13.65 | 13.41 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | EntrezGene:831518 | UniProt:A0A178UBS3 | ProteinID:AED92310.1 | ArrayExpress:AT5G16560 |
| EnsemblPlantsGene:AT5G16560 | RefSeq:AT5G16560 | TAIR:AT5G16560 | RefSeq:AT5G16560-TAIR-G | EnsemblPlants:AT5G16560.1 | TAIR:AT5G16560.1 |
| EMBL:AY030192 | EMBL:AY037864 | EMBL:AY048688 | ProteinID:BAB09625.1 | EMBL:BT026436 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009943 | GO:GO:0009944 | GO:GO:0009956 | GO:GO:0009987 |
| GO:GO:0010051 | GO:GO:0010158 | GO:GO:0030154 | GO:GO:0044212 | GO:GO:0048440 | GO:GO:0048481 |
| GO:GO:1905392 | InterPro:Homeobox-like_sf | Symbol:KAN | InterPro:Myb_dom_plants | RefSeq:NP_568334.1 | ProteinID:OAO91129.1 |
| PFAM:PF00249 | PO:PO:0000015 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 |
| PO:PO:0004703 | PO:PO:0005417 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009035 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0025281 | PANTHER:PTHR31496 | PANTHER:PTHR31496:SF3 | UniProt:Q93WJ9 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI00000A2111 | SEG:seg | : | : | : |
Description
KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
Coordinates
chr5:-:5406863..5411766
Molecular Weight (calculated)
45848.1 Da
IEP (calculated)
8.655
GRAVY (calculated)
-1.006
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.