Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23916 | Canola | nucleus | 75.36 | 78.2 |
| CDY69225 | Canola | mitochondrion | 46.38 | 77.58 |
| Solyc04g079600.2.1 | Tomato | nucleus | 42.39 | 37.99 |
| PGSC0003DMT400030518 | Potato | nucleus | 41.3 | 37.01 |
| KRH05752 | Soybean | nucleus | 41.3 | 34.44 |
| Bra035311.1-P | Field mustard | nucleus | 77.54 | 34.29 |
| CDY02401 | Canola | nucleus | 77.54 | 34.29 |
| VIT_18s0001g11390.t01 | Wine grape | nucleus | 40.58 | 34.04 |
| AT4G04555.1 | Thale cress | mitochondrion | 12.68 | 33.02 |
| KRH51927 | Soybean | nucleus | 34.42 | 28.79 |
| KRH61226 | Soybean | nucleus | 33.33 | 27.79 |
| AT4G17695.1 | Thale cress | nucleus | 31.88 | 27.33 |
| AT5G16560.1 | Thale cress | nucleus | 38.04 | 26.05 |
| AT4G04580.1 | Thale cress | nucleus | 15.22 | 25.3 |
| AT1G32240.1 | Thale cress | nucleus | 35.14 | 25.0 |
| AT4G04605.1 | Thale cress | mitochondrion | 15.94 | 20.0 |
| AT2G42660.1 | Thale cress | nucleus | 18.12 | 19.61 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 16.67 | 17.97 |
| AT1G14600.1 | Thale cress | nucleus | 15.58 | 16.86 |
| AT2G38300.1 | Thale cress | nucleus | 19.2 | 15.59 |
| AT2G40260.1 | Thale cress | nucleus | 21.38 | 14.39 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | EntrezGene:834270 | ProteinID:AED94838.1 | ProteinID:AED94839.1 | ArrayExpress:AT5G42630 |
| EnsemblPlantsGene:AT5G42630 | RefSeq:AT5G42630 | TAIR:AT5G42630 | RefSeq:AT5G42630-TAIR-G | EnsemblPlants:AT5G42630.1 | TAIR:AT5G42630.1 |
| EMBL:AY048691 | ProteinID:BAB10501.1 | EMBL:BT026053 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0030312 | GO:GO:0044212 | GO:GO:0048481 | GO:GO:0080060 | InterPro:Homeobox-like_sf |
| Symbol:KAN4 | InterPro:Myb_dom_plants | RefSeq:NP_001119363.1 | RefSeq:NP_199077.1 | PFAM:PF00249 | PO:PO:0000037 |
| PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020021 | PO:PO:0020100 |
| PO:PO:0025022 | PANTHER:PTHR31496 | PANTHER:PTHR31496:SF12 | UniProt:Q9FJV5 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI00000A3095 | SEG:seg | : | : | : |
Description
KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
Coordinates
chr5:-:17073673..17075904
Molecular Weight (calculated)
30963.0 Da
IEP (calculated)
7.899
GRAVY (calculated)
-0.872
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.