Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23916 | Canola | nucleus | 90.91 | 56.39 |
| CDY71094 | Canola | mitochondrion | 23.64 | 48.75 |
| AT5G42630.1 | Thale cress | nucleus | 77.58 | 46.38 |
| CDY00733 | Canola | mitochondrion, nucleus | 23.03 | 26.76 |
| CDY68011 | Canola | nucleus | 32.73 | 25.59 |
| CDX84102 | Canola | nucleus | 41.21 | 25.09 |
| Solyc04g079600.2.1 | Tomato | nucleus | 46.67 | 25.0 |
| Bra035311.1-P | Field mustard | nucleus | 93.33 | 24.68 |
| PGSC0003DMT400030518 | Potato | nucleus | 46.06 | 24.68 |
| CDY02401 | Canola | nucleus | 92.73 | 24.52 |
| CDY16660 | Canola | mitochondrion | 24.24 | 23.12 |
| VIT_18s0001g11390.t01 | Wine grape | nucleus | 45.45 | 22.8 |
| KRH05752 | Soybean | nucleus | 44.85 | 22.36 |
| CDY54255 | Canola | nucleus | 40.0 | 22.07 |
| CDX94559 | Canola | mitochondrion | 23.03 | 21.97 |
| CDX78794 | Canola | nucleus | 41.21 | 21.79 |
| KRH51927 | Soybean | nucleus | 42.42 | 21.21 |
| KRH61226 | Soybean | nucleus | 42.42 | 21.15 |
| CDX93847 | Canola | nucleus | 43.03 | 21.01 |
| CDY28659 | Canola | nucleus | 38.79 | 20.98 |
| CDY35557 | Canola | nucleus | 41.82 | 20.66 |
| CDY01293 | Canola | nucleus | 43.03 | 20.52 |
| CDX97319 | Canola | mitochondrion | 25.45 | 20.29 |
| CDX70701 | Canola | nucleus | 47.27 | 20.26 |
| CDX78699 | Canola | nucleus | 47.27 | 20.21 |
| CDY67252 | Canola | nucleus | 47.88 | 20.05 |
| CDY43006 | Canola | nucleus | 41.21 | 20.0 |
| CDX69443 | Canola | nucleus | 47.27 | 19.85 |
| CDX85500 | Canola | nucleus | 47.88 | 19.8 |
| CDY38105 | Canola | nucleus | 47.27 | 19.6 |
| CDY59419 | Canola | nucleus | 24.85 | 17.08 |
| CDX82805 | Canola | nucleus | 24.85 | 16.94 |
| CDX81654 | Canola | nucleus | 24.24 | 16.53 |
| CDY45272 | Canola | nucleus | 24.24 | 16.19 |
| CDY09392 | Canola | nucleus | 25.45 | 16.03 |
| CDY70922 | Canola | nucleus | 24.85 | 15.83 |
| CDY41090 | Canola | nucleus | 23.64 | 15.79 |
| CDY17443 | Canola | nucleus | 24.24 | 15.15 |
| CDY17617 | Canola | nucleus | 23.64 | 15.0 |
| CDX74898 | Canola | nucleus | 29.09 | 14.04 |
| CDX91442 | Canola | nucleus | 29.09 | 13.71 |
| CDY04115 | Canola | nucleus | 22.42 | 13.65 |
| CDY67147 | Canola | nucleus | 26.06 | 13.15 |
| CDY42825 | Canola | nucleus | 26.06 | 13.15 |
| CDY52431 | Canola | nucleus | 30.91 | 13.11 |
| CDY07612 | Canola | nucleus | 29.7 | 12.5 |
| CDX74803 | Canola | nucleus | 28.48 | 12.24 |
| CDY18860 | Canola | nucleus | 29.09 | 11.79 |
| CDY07070 | Canola | nucleus | 29.7 | 11.78 |
| CDX93206 | Canola | nucleus | 29.7 | 11.72 |
| CDY04116 | Canola | nucleus | 9.09 | 7.39 |
| CDY69675 | Canola | cytosol, nucleus | 1.82 | 2.59 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078JS44 | UniProt:A0A078JS44 | EnsemblPlants:CDY69225 | ProteinID:CDY69225 |
| ProteinID:CDY69225.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00084235001 | InterPro:Homeobox-like_sf |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PANTHER:PTHR31496 | PANTHER:PTHR31496:SF12 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI0004EE2A4F | SEG:seg | : | : | : |
Description
BnaA02g36680DBnaA02g36680D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JS44]
Coordinates
chrLK038904:+:2..1475
Molecular Weight (calculated)
18594.0 Da
IEP (calculated)
10.111
GRAVY (calculated)
-0.848
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: RDFKRTSSSV VSLKRSIRAP RMRWTSTLHA HFVHAVQLLG GHERATPKSV LELMNVKDLT LAHVKSHLQM YRTVKCTDKR SSGERKVEKE AEQKTEDNNN
101: NNEDADADPI SPNSSSVQKT QRSPWSSTKG VSMSISQADP HMEINRITKD DTMCKSSSDL TLIKC
101: NNEDADADPI SPNSSSVQKT QRSPWSSTKG VSMSISQADP HMEINRITKD DTMCKSSSDL TLIKC
001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC
Arabidopsis Description
KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.