Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09392 | Canola | nucleus | 98.46 | 97.33 |
| CDY17617 | Canola | nucleus | 81.85 | 81.54 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 79.54 | 80.47 |
| CDY17443 | Canola | nucleus | 79.54 | 78.03 |
| CDY69675 | Canola | cytosol, nucleus | 34.36 | 76.72 |
| Bra017425.1-P | Field mustard | nucleus | 58.3 | 76.26 |
| CDY04115 | Canola | nucleus | 78.38 | 74.91 |
| CDY04116 | Canola | nucleus | 55.21 | 70.44 |
| CDY71094 | Canola | mitochondrion | 19.69 | 63.75 |
| CDX81654 | Canola | nucleus | 58.3 | 62.4 |
| CDY45272 | Canola | nucleus | 59.46 | 62.35 |
| CDY41090 | Canola | nucleus | 59.46 | 62.35 |
| CDX82805 | Canola | nucleus | 57.92 | 61.98 |
| CDY59419 | Canola | nucleus | 56.37 | 60.83 |
| KRG89170 | Soybean | nucleus | 38.22 | 33.67 |
| KRH49492 | Soybean | nucleus | 39.0 | 33.67 |
| CDY00733 | Canola | mitochondrion, nucleus | 17.37 | 31.69 |
| CDX94559 | Canola | mitochondrion | 19.69 | 29.48 |
| CDY16660 | Canola | mitochondrion | 19.69 | 29.48 |
| KRH36060 | Soybean | nucleus | 26.64 | 28.28 |
| KRG90693 | Soybean | nucleus | 32.43 | 27.72 |
| VIT_01s0137g00050.t01 | Wine grape | nucleus | 32.05 | 27.39 |
| CDX97319 | Canola | mitochondrion | 21.62 | 27.05 |
| GSMUA_Achr11P... | Banana | nucleus | 23.55 | 26.07 |
| PGSC0003DMT400075668 | Potato | nucleus | 29.73 | 25.0 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 28.19 | 25.0 |
| CDY69225 | Canola | mitochondrion | 15.83 | 24.85 |
| Solyc04g008480.1.1 | Tomato | nucleus | 28.19 | 24.58 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 22.39 | 23.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.87 | 22.71 |
| CDX74898 | Canola | nucleus | 28.57 | 21.64 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 23.17 | 20.98 |
| CDX91442 | Canola | nucleus | 28.19 | 20.86 |
| CDY67147 | Canola | nucleus | 25.48 | 20.18 |
| CDY42825 | Canola | nucleus | 25.1 | 19.88 |
| CDY52431 | Canola | nucleus | 28.19 | 18.77 |
| CDX74803 | Canola | nucleus | 27.03 | 18.23 |
| CDY07612 | Canola | nucleus | 27.03 | 17.86 |
| CDY54255 | Canola | nucleus | 20.46 | 17.73 |
| CDX84102 | Canola | nucleus | 18.53 | 17.71 |
| CDY68011 | Canola | nucleus | 14.29 | 17.54 |
| CDY18860 | Canola | nucleus | 27.41 | 17.44 |
| CDY07070 | Canola | nucleus | 27.41 | 17.07 |
| CDX78794 | Canola | nucleus | 20.46 | 16.99 |
| CDY35557 | Canola | nucleus | 21.62 | 16.77 |
| CDX93847 | Canola | nucleus | 21.24 | 16.27 |
| CDX93206 | Canola | nucleus | 26.25 | 16.27 |
| CDY43006 | Canola | nucleus | 21.24 | 16.18 |
| CDY23916 | Canola | nucleus | 16.6 | 16.17 |
| CDY01293 | Canola | nucleus | 20.85 | 15.61 |
| CDY28659 | Canola | nucleus | 17.37 | 14.75 |
| CDX70701 | Canola | nucleus | 19.3 | 12.99 |
| CDX69443 | Canola | nucleus | 19.69 | 12.98 |
| CDX78699 | Canola | nucleus | 19.3 | 12.95 |
| CDY67252 | Canola | nucleus | 19.69 | 12.94 |
| CDY38105 | Canola | nucleus | 19.3 | 12.56 |
| CDX85500 | Canola | nucleus | 19.3 | 12.53 |
| CDY02401 | Canola | nucleus | 16.6 | 6.89 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:A0A078JZ20 | UniProt:A0A078JZ20 | EnsemblPlants:CDY70922 | ProteinID:CDY70922 |
| ProteinID:CDY70922.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00008402001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 |
| PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EF181F | SEG:seg |
Description
BnaCnng70380DBnaCnng70380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZ20]
Coordinates
chrLK043747:-:780..2834
Molecular Weight (calculated)
28972.1 Da
IEP (calculated)
9.271
GRAVY (calculated)
-0.808
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKAAGRNGN ENYNGVGFNG QRGGGVRPYV RSPVPRLRWT PDLHRCFVNA VDMLGGQHRA TPKLVLKMMD VKGLTISHVK SHLQMHRGSK LTLGKPEESS
101: SSSIRRRQDT EEDNLHDNLS LHTRNDCLLG FHSFPLSSHS SLRGGRKKEQ TSESSGDDDA DFLHTMNMKK TKETTMFRSH HFHKKTEKEK NTWQEHEEEA
201: DLSLSLSLNH HHWRSNGSSV SETSEAVSTC SAPFIFKDCL GSSPKIDLNL NLSISLLGS
101: SSSIRRRQDT EEDNLHDNLS LHTRNDCLLG FHSFPLSSHS SLRGGRKKEQ TSESSGDDDA DFLHTMNMKK TKETTMFRSH HFHKKTEKEK NTWQEHEEEA
201: DLSLSLSLNH HHWRSNGSSV SETSEAVSTC SAPFIFKDCL GSSPKIDLNL NLSISLLGS
001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.