Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49492 | Soybean | nucleus | 91.84 | 90.0 |
| KRH36060 | Soybean | nucleus | 40.48 | 48.77 |
| Bra026202.1-P | Field mustard | nucleus | 28.57 | 42.0 |
| CDX82805 | Canola | nucleus | 33.67 | 40.91 |
| CDX81654 | Canola | nucleus | 33.67 | 40.91 |
| CDY59419 | Canola | nucleus | 32.99 | 40.42 |
| Bra026818.1-P | Field mustard | nucleus | 32.99 | 40.42 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 34.01 | 39.06 |
| CDY70922 | Canola | nucleus | 33.67 | 38.22 |
| Bra026618.1-P | Field mustard | nucleus | 34.01 | 38.17 |
| CDY09392 | Canola | nucleus | 34.01 | 38.17 |
| CDY45272 | Canola | nucleus | 31.97 | 38.06 |
| CDY17617 | Canola | nucleus | 33.33 | 37.69 |
| CDY41090 | Canola | nucleus | 31.63 | 37.65 |
| Bra024836.1-P | Field mustard | nucleus | 32.99 | 37.45 |
| AT1G14600.1 | Thale cress | nucleus | 31.97 | 36.86 |
| CDY17443 | Canola | nucleus | 32.99 | 36.74 |
| KRG90693 | Soybean | nucleus | 37.07 | 35.97 |
| CDY04115 | Canola | nucleus | 31.63 | 34.32 |
| KRH14524 | Soybean | nucleus | 21.43 | 33.69 |
| VIT_01s0137g00050.t01 | Wine grape | nucleus | 34.69 | 33.66 |
| KRG99004 | Soybean | nucleus | 22.11 | 31.25 |
| KRH73595 | Soybean | nucleus | 22.45 | 30.99 |
| Bra017425.1-P | Field mustard | nucleus | 20.75 | 30.81 |
| GSMUA_Achr11P... | Banana | nucleus | 23.81 | 29.91 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 28.57 | 28.77 |
| PGSC0003DMT400075668 | Potato | nucleus | 29.93 | 28.57 |
| CDY04116 | Canola | nucleus | 19.73 | 28.57 |
| Solyc04g008480.1.1 | Tomato | nucleus | 28.57 | 28.28 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 23.47 | 27.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.21 | 27.12 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 24.15 | 24.83 |
| KRH15279 | Soybean | mitochondrion | 15.31 | 23.32 |
| KRH36473 | Soybean | nucleus | 21.43 | 22.26 |
| KRH11454 | Soybean | nucleus | 21.09 | 21.6 |
| KRH11029 | Soybean | nucleus | 25.17 | 20.27 |
| KRH21258 | Soybean | nucleus | 24.49 | 19.3 |
| KRH75999 | Soybean | nucleus | 21.77 | 18.66 |
| KRH65638 | Soybean | nucleus | 21.43 | 18.21 |
| KRH58975 | Soybean | nucleus | 24.15 | 17.71 |
| KRH42874 | Soybean | nucleus | 23.81 | 17.41 |
| KRH27060 | Soybean | nucleus | 21.43 | 17.12 |
| KRH49433 | Soybean | nucleus | 20.75 | 16.67 |
| KRH74367 | Soybean | nucleus | 15.65 | 16.67 |
| KRH22274 | Soybean | nucleus | 20.75 | 16.53 |
| KRH00305 | Soybean | nucleus | 20.75 | 16.53 |
| KRH05752 | Soybean | nucleus | 18.03 | 16.01 |
| KRH51927 | Soybean | nucleus | 17.69 | 15.76 |
| KRH61226 | Soybean | nucleus | 17.69 | 15.71 |
| KRH39575 | Soybean | nucleus | 19.39 | 14.62 |
| KRH45989 | Soybean | nucleus | 6.8 | 12.42 |
| KRH39002 | Soybean | nucleus | 17.35 | 12.38 |
| KRH48713 | Soybean | nucleus | 16.67 | 11.78 |
| KRH72942 | Soybean | nucleus | 17.35 | 10.94 |
| KRH17301 | Soybean | nucleus | 17.01 | 10.78 |
| KRG97985 | Soybean | nucleus | 17.35 | 10.71 |
| KRH30907 | Soybean | nucleus | 17.35 | 10.1 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100796564 | MapMan:15.5.2.3 | EMBL:ACUP02012190 | EnsemblPlantsGene:GLYMA_20G006000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7N0L3 | EnsemblPlants:KRG89170 |
| ProteinID:KRG89170 | ProteinID:KRG89170.1 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00023DE6AB |
Description
hypothetical protein
Coordinates
chr20:+:592947..597814
Molecular Weight (calculated)
32974.3 Da
IEP (calculated)
8.978
GRAVY (calculated)
-0.531
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCGREGVV RQYIRSKVPR LRWTPELHRC FVYAIETLGG HHKATPKLVL QLMDVKGLTI SHVKSHLQMY RSMKGDSCRQ DRTSTQHRKQ SFQKHDEASD
101: VGFHSCFKFI RKESDSLSGY SNFSSKRTRI EKTSLLSGIL QCSQRICEAD PNPYTTFYDY LQSMAKEKGI KKICVGSIWQ QTQPLSTTFH MLTKQESDLL
201: QVAKLNDKQP LNEVGNTWRK GLGAENEDIG GCELSLSITL PQPHPSSQKS NTSSVSETSE AFSLCPEFSN NVIMGCSSSS NVPKTINLDL SLAI
101: VGFHSCFKFI RKESDSLSGY SNFSSKRTRI EKTSLLSGIL QCSQRICEAD PNPYTTFYDY LQSMAKEKGI KKICVGSIWQ QTQPLSTTFH MLTKQESDLL
201: QVAKLNDKQP LNEVGNTWRK GLGAENEDIG GCELSLSITL PQPHPSSQKS NTSSVSETSE AFSLCPEFSN NVIMGCSSSS NVPKTINLDL SLAI
001: MGRCGRSNDG VIGGVRPYVR SPVPRLRWTP ELHRSFVHAV DLLGGQYKAT PKLVLKIMDV KGLTISHVKS HLQMYRGSRI TLLGKPEESS SPSSRRRRRQ
101: DNEEDHLHDN LSVHARNDCL LGFHSFNFRE QTSATDNDDD DFLNIMNMER TKTFAGNGES IKFQSHHSLE AENTKNIWKN TWRENEHEEE EELSLSLSLN
201: HPHNHQQRWK SNASSSLSET SEAVSSSSGP FIFRDCFASS KIDLNLNLSF SLLHS
101: DNEEDHLHDN LSVHARNDCL LGFHSFNFRE QTSATDNDDD DFLNIMNMER TKTFAGNGES IKFQSHHSLE AENTKNIWKN TWRENEHEEE EELSLSLSLN
201: HPHNHQQRWK SNASSSLSET SEAVSSSSGP FIFRDCFASS KIDLNLNLSF SLLHS
Arabidopsis Description
Putative Myb family transcription factor At1g14600 [Source:UniProtKB/Swiss-Prot;Acc:Q700D9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.