Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g01380.t01 | Wine grape | mitochondrion | 15.18 | 60.53 |
| VIT_12s0028g00980.t01 | Wine grape | nucleus | 14.19 | 59.72 |
| KRG90693 | Soybean | nucleus | 57.76 | 57.76 |
| PGSC0003DMT400075668 | Potato | nucleus | 49.84 | 49.03 |
| Solyc04g008480.1.1 | Tomato | nucleus | 47.52 | 48.48 |
| VIT_00s1624g00010.t01 | Wine grape | nucleus | 17.82 | 43.9 |
| VIT_08s0058g00250.t01 | Wine grape | nucleus | 15.84 | 41.38 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 32.01 | 39.11 |
| Bra026202.1-P | Field mustard | nucleus | 25.74 | 39.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.98 | 35.93 |
| KRG89170 | Soybean | nucleus | 33.66 | 34.69 |
| KRH49492 | Soybean | nucleus | 34.32 | 34.67 |
| VIT_06s0004g07000.t01 | Wine grape | nucleus | 19.8 | 33.9 |
| GSMUA_Achr11P... | Banana | nucleus | 26.07 | 33.76 |
| AT1G14600.1 | Thale cress | nucleus | 28.05 | 33.33 |
| CDY41090 | Canola | nucleus | 27.06 | 33.2 |
| AT2G02060.1 | Thale cress | nucleus, plastid | 27.72 | 32.81 |
| CDY45272 | Canola | nucleus | 26.73 | 32.79 |
| CDX81654 | Canola | nucleus | 26.07 | 32.64 |
| CDX82805 | Canola | nucleus | 26.07 | 32.64 |
| CDY59419 | Canola | nucleus | 25.74 | 32.5 |
| Bra026818.1-P | Field mustard | nucleus | 25.74 | 32.5 |
| Bra024836.1-P | Field mustard | nucleus | 27.72 | 32.43 |
| CDY17617 | Canola | nucleus | 27.72 | 32.31 |
| CDY70922 | Canola | nucleus | 27.39 | 32.05 |
| CDY09392 | Canola | nucleus | 27.39 | 31.68 |
| Bra026618.1-P | Field mustard | nucleus | 27.39 | 31.68 |
| CDY17443 | Canola | nucleus | 26.07 | 29.92 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 27.72 | 28.77 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 27.06 | 28.67 |
| CDY04115 | Canola | nucleus | 24.75 | 27.68 |
| VIT_12s0028g02080.t01 | Wine grape | nucleus | 21.12 | 26.45 |
| KRH36060 | Soybean | nucleus | 21.12 | 26.23 |
| Bra017425.1-P | Field mustard | nucleus | 15.18 | 23.23 |
| CDY04116 | Canola | nucleus | 14.19 | 21.18 |
| VIT_13s0067g01500.t01 | Wine grape | extracellular, vacuole | 25.74 | 16.63 |
| VIT_18s0001g11390.t01 | Wine grape | nucleus | 17.49 | 16.11 |
| VIT_16s0039g01900.t01 | Wine grape | nucleus | 16.83 | 15.79 |
| VIT_02s0012g01940.t01 | Wine grape | nucleus | 18.81 | 15.49 |
| VIT_04s0043g00340.t01 | Wine grape | nucleus | 17.82 | 11.56 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100262842 | wikigene:100262842 | MapMan:15.5.2.3 | EMBL:AM452429 | ProteinID:CAN63286 |
| ProteinID:CAN63286.1 | ProteinID:CBI16847 | ProteinID:CBI16847.3 | ncoils:Coil | UniProt:D7SMG8 | EMBL:FN594954 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EntrezGene:LOC100262842 |
| wikigene:LOC100262842 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 |
| PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001982927 | ArrayExpress:VIT_01s0137g00050 |
| EnsemblPlantsGene:VIT_01s0137g00050 | EnsemblPlants:VIT_01s0137g00050.t01 | unigene:Vvi.21800 | RefSeq:XP_002281928 | RefSeq:XP_002281928.1 | SEG:seg |
Description
No Description!
Coordinates
chr1:+:6602502..6605922
Molecular Weight (calculated)
33979.7 Da
IEP (calculated)
6.734
GRAVY (calculated)
-0.703
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCGRNGAV RQYIRSKVPR LRWTPELHHC FVHAIERLGG QDKATPKLVL QLMDVRGLTI SHVKSHLQMY RSMKSDIGRQ DRSSTQQRKQ SFEDHDGCVD
101: EETGDVGFHP PLKSIEESDS QFIYSPLRAK RARIETMSSI SENLQCSQRI CETVATPYSF DDYLAEKRGI KEGGGFRWQT QAPSPAFPLP HDLYNLNPFG
201: YAAEESDFLK IAKLEDQKHA VAQMNKNEDN ERRPADGEEA GGCGLSLSLS LHHPSTQRSN ASSTSEISEA FSSYPRSNFK DSFGSYSEER SINLDLSIAL
301: CGI
101: EETGDVGFHP PLKSIEESDS QFIYSPLRAK RARIETMSSI SENLQCSQRI CETVATPYSF DDYLAEKRGI KEGGGFRWQT QAPSPAFPLP HDLYNLNPFG
201: YAAEESDFLK IAKLEDQKHA VAQMNKNEDN ERRPADGEEA GGCGLSLSLS LHHPSTQRSN ASSTSEISEA FSSYPRSNFK DSFGSYSEER SINLDLSIAL
301: CGI
001: MGKSSGRNGN GSFNGNKFHG VRPYVRSPVP RLRWTPDLHR CFVHAVEILG GQHRATPKLV LKMMDVKGLT ISHVKSHLQM YRGGSKLTLE KPEESSSSSI
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
101: RRRQDSEEDY YLHDNLSLHT RNDCLLGFHS FPLSSHSSFR GGGGGRTKEQ QTSESGGYDD DADFLHIKKM NDTTTFLSHH FPKGTEEWRE QEHEEEEEDL
201: SLSLSLNHHH WRSNGSSVVS ETSEAAVSTC SAPFVSKDCF GSSKIDLNLS ISLLGS
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.