CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
extracellular 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05752	Soybean	nucleus	91.71	53.47
KRH51927	Soybean	nucleus	60.1	35.15
KRH61226	Soybean	nucleus	59.59	34.74
KRH14524	Soybean	nucleus	20.21	20.86
KRH74367	Soybean	nucleus	29.53	20.65
KRH73595	Soybean	nucleus	21.76	19.72
KRG99004	Soybean	nucleus	19.69	18.27
KRH39575	Soybean	nucleus	36.79	18.21
KRH39002	Soybean	nucleus	36.79	17.23
KRH48713	Soybean	nucleus	36.27	16.83
KRG97985	Soybean	nucleus	40.93	16.6
KRH17301	Soybean	nucleus	39.9	16.59
KRH72942	Soybean	nucleus	39.9	16.52
KRH36473	Soybean	nucleus	23.83	16.25
KRH11454	Soybean	nucleus	23.83	16.03
KRG90693	Soybean	nucleus	24.87	15.84
KRH30907	Soybean	nucleus	40.41	15.45
KRG89170	Soybean	nucleus	23.32	15.31
KRH49492	Soybean	nucleus	22.8	14.67
KRH11029	Soybean	nucleus	26.94	14.25
KRH75999	Soybean	nucleus	24.87	13.99
KRH21258	Soybean	nucleus	26.42	13.67
KRH65638	Soybean	nucleus	24.35	13.58
KRH22274	Soybean	nucleus	25.91	13.55
KRH27060	Soybean	nucleus	25.39	13.32
KRH49433	Soybean	nucleus	24.35	12.84
KRH00305	Soybean	nucleus	24.35	12.74
KRH58975	Soybean	nucleus	25.91	12.47
KRH42874	Soybean	nucleus	25.39	12.19
KRH36060	Soybean	nucleus	12.95	10.25
KRH45989	Soybean	nucleus	6.74	8.07

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:106795723	MapMan:15.5.2.3	EMBL:ACUP02008573	EnsemblPlantsGene:GLYMA_14G0790002	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0044212	InterPro:Homeobox-like_sf	UniProt:I1M8H7	EnsemblPlants:KRH15279
ProteinID:KRH15279	ProteinID:KRH15279.1	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496	PANTHER:PTHR31496:SF12
InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00023D3AF0	:	:

Description

hypothetical protein

Coordinates

chr14:-:6727339..6731452

Molecular Weight (calculated)

21569.5 Da

IEP (calculated)

7.475

GRAVY (calculated)

-0.700

Length

193 amino acids

Sequence
(BLAST)

001: MMRWTTTLHA HFVHAVQLLG GHERATPKSV LELMNVKDLT LAHVKSHLQM YRTVKSTDKG ITAAGHGQTG IGLMNPRPGI NVHLHALSPI CDTPNLPDPI
101: QSSHRTPWQS SIETKTNNRR QEEPEIGLTY SHLKGNNNNN ETTVDGHNNY GGLDSTPLSR SEEAMLDLEF TLGRPNWQKD HTESSRELTL LKC

Best Arabidopsis Sequence Match ( AT5G42630.1 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.