Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78699 | Canola | nucleus | 97.4 | 97.15 |
| CDY38105 | Canola | nucleus | 87.27 | 84.42 |
| CDY67252 | Canola | nucleus | 85.45 | 83.5 |
| CDX85500 | Canola | nucleus | 86.49 | 83.46 |
| CDX69443 | Canola | nucleus | 84.94 | 83.21 |
| CDY28659 | Canola | nucleus | 61.82 | 78.03 |
| CDY71094 | Canola | mitochondrion | 10.91 | 52.5 |
| CDY69225 | Canola | mitochondrion | 20.26 | 47.27 |
| Solyc06g066340.2.1 | Tomato | nucleus | 30.39 | 40.21 |
| Bra006360.1-P | Field mustard | nucleus | 75.84 | 39.84 |
| VIT_04s0043g00340.t01 | Wine grape | nucleus | 47.27 | 38.97 |
| CDY23916 | Canola | nucleus | 26.75 | 38.72 |
| CDY35557 | Canola | nucleus | 33.51 | 38.62 |
| CDX93847 | Canola | nucleus | 33.51 | 38.17 |
| CDX84102 | Canola | nucleus | 26.75 | 38.01 |
| CDY68011 | Canola | nucleus | 20.78 | 37.91 |
| CDY43006 | Canola | nucleus | 33.25 | 37.65 |
| CDY01293 | Canola | nucleus | 33.51 | 37.28 |
| PGSC0003DMT400043200 | Potato | nucleus | 35.58 | 34.42 |
| CDX78794 | Canola | nucleus | 27.53 | 33.97 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 31.43 | 32.27 |
| CDY54255 | Canola | nucleus | 24.94 | 32.11 |
| KRH39002 | Soybean | nucleus | 34.03 | 31.8 |
| Os08t0426866-00 | Rice | nucleus | 38.44 | 31.62 |
| KRH48713 | Soybean | nucleus | 34.03 | 31.49 |
| KXG25180 | Sorghum | nucleus | 38.18 | 30.95 |
| Zm00001d032249_P002 | Maize | plastid | 36.1 | 28.84 |
| CDY00733 | Canola | mitochondrion, nucleus | 9.61 | 26.06 |
| CDY16660 | Canola | mitochondrion | 10.91 | 24.28 |
| CDX97319 | Canola | mitochondrion | 12.73 | 23.67 |
| CDX94559 | Canola | mitochondrion | 10.39 | 23.12 |
| CDY59419 | Canola | nucleus | 12.73 | 20.42 |
| CDX81654 | Canola | nucleus | 12.73 | 20.25 |
| CDX82805 | Canola | nucleus | 12.73 | 20.25 |
| CDY41090 | Canola | nucleus | 12.73 | 19.84 |
| CDY45272 | Canola | nucleus | 12.73 | 19.84 |
| CDY09392 | Canola | nucleus | 13.25 | 19.47 |
| CDY70922 | Canola | nucleus | 12.99 | 19.3 |
| CDY17443 | Canola | nucleus | 12.47 | 18.18 |
| CDY17617 | Canola | nucleus | 12.21 | 18.08 |
| CDY02401 | Canola | nucleus | 27.01 | 16.67 |
| CDY04115 | Canola | nucleus | 11.17 | 15.87 |
| CDX74898 | Canola | nucleus | 13.25 | 14.91 |
| CDX74803 | Canola | nucleus | 14.81 | 14.84 |
| CDX91442 | Canola | nucleus | 13.25 | 14.57 |
| CDY67147 | Canola | nucleus | 12.21 | 14.37 |
| CDY42825 | Canola | nucleus | 12.21 | 14.37 |
| CDY52431 | Canola | nucleus | 14.29 | 14.14 |
| CDY07612 | Canola | nucleus | 14.29 | 14.03 |
| CDY18860 | Canola | nucleus | 14.81 | 14.0 |
| CDY07070 | Canola | nucleus | 14.55 | 13.46 |
| CDX93206 | Canola | nucleus | 14.55 | 13.4 |
| CDY04116 | Canola | nucleus | 4.42 | 8.37 |
| CDY69675 | Canola | cytosol, nucleus | 1.04 | 3.45 |
Protein Annotations
| EnsemblPlants:CDX70701 | EnsemblPlantsGene:GSBRNA2T00140565001 | Gene3D:1.10.10.60 | GO:A0A078C165 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Myb_dom_plants | InterPro:SANT/Myb | PANTHER:PTHR31496 |
| PFAM:PF00249 | ProteinID:CDX70701 | ProteinID:CDX70701.1 | SEG:seg | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EDE46E | MapMan:15.5.2.3 | : | : | : | : |
Description
BnaC03g07850D
Coordinates
chrLK031791:-:1598010..1602806
Molecular Weight (calculated)
43282.0 Da
IEP (calculated)
8.902
GRAVY (calculated)
-0.957
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEGVFLEK PTSNTTTTLP DLSLNISLPD THHNESSKEL SRRSSQTDNN RSSNFELSLS HHNNPSSNPS TRIIHCPDRR NLYNNHILNG GSLHQRVDES
101: EINNIHRPIR GIPVYHNRSF PFHQQASPSS LPSLGGDFSI LNSSSGYNNA YRSFQSSPRL KGVPMHHHNH YGVVGSSDSS YPHHHNHHHH GMVRSRFLPK
201: MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNERA QSDDTSPHRE
301: IDFPSTTQPR WSNSSGETWP LSNNCASDID TVIRTSSTSV ISHHQRSSLQ NQDQRSNDQG KKCGDLSCNN PSLEFTLGRP DWHEK
101: EINNIHRPIR GIPVYHNRSF PFHQQASPSS LPSLGGDFSI LNSSSGYNNA YRSFQSSPRL KGVPMHHHNH YGVVGSSDSS YPHHHNHHHH GMVRSRFLPK
201: MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNERA QSDDTSPHRE
301: IDFPSTTQPR WSNSSGETWP LSNNCASDID TVIRTSSTSV ISHHQRSSLQ NQDQRSNDQG KKCGDLSCNN PSLEFTLGRP DWHEK
001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK
Arabidopsis Description
KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.