Factsheet for Bra006360.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78699	Canola	nucleus	40.38	76.68
CDX70701	Canola	nucleus	39.84	75.84
Bra008613.1-P	Field mustard	nucleus	25.65	64.6
Bra023570.1-P	Field mustard	cytosol	30.7	56.53
VIT_04s0043g00340.t01	Wine grape	nucleus	18.01	28.27
Solyc06g066340.2.1	Tomato	nucleus	11.19	28.18
PGSC0003DMT400043200	Potato	nucleus	13.78	25.38
Bra023254.1-P	Field mustard	nucleus	12.14	24.32
Bra018498.1-P	Field mustard	mitochondrion	2.32	23.94
Bra033844.1-P	Field mustard	nucleus	12.14	22.7
GSMUA_Achr4P04510_001	Banana	nucleus	11.6	22.67
Bra040176.1-P	Field mustard	nucleus	9.69	22.4
Os08t0426866-00	Rice	nucleus	14.05	22.01
Bra021038.1-P	Field mustard	plastid	5.32	21.79
KXG25180	Sorghum	nucleus	13.92	21.47
KRH39002	Soybean	nucleus	11.87	21.12
KRH48713	Soybean	nucleus	11.87	20.91
Zm00001d032249_P002	Maize	plastid	13.23	20.12
Bra026202.1-P	Field mustard	nucleus	4.64	17.0
Bra026818.1-P	Field mustard	nucleus	4.37	13.33
Bra029503.1-P	Field mustard	mitochondrion	3.0	12.79
Bra026618.1-P	Field mustard	nucleus	4.5	12.6
Bra024836.1-P	Field mustard	nucleus	4.23	11.97
Bra035311.1-P	Field mustard	nucleus	9.28	10.9
Bra000180.1-P	Field mustard	nucleus	5.46	10.28
Bra005124.1-P	Field mustard	nucleus	4.5	9.79
Bra000270.1-P	Field mustard	nucleus	3.55	9.03
Bra004973.1-P	Field mustard	nucleus	4.91	8.85
Bra017021.1-P	Field mustard	nucleus	2.86	5.77
Bra017425.1-P	Field mustard	nucleus	1.23	4.55

Protein Annotations

EnsemblPlants:Bra006360.1	EnsemblPlants:Bra006360.1-P	EnsemblPlantsGene:Bra006360	Gene3D:1.10.10.60	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR37254	SEG:seg	TMHMM:TMhelix	UniParc:UPI000253F603	UniProt:M4CQ71
MapMan:15.5.2.3	:	:	:	:	:

Description

AT5G16520 (E=7e-189) | unknown protein

Coordinates

chrA03:-:3160065..3174082

Molecular Weight (calculated)

81636.0 Da

IEP (calculated)

9.166

GRAVY (calculated)

-0.524

Length

733 amino acids

Sequence
(BLAST)

001: MSMEGVFLEK PTSNTTTTLP DLSLNISLPD THHNESSKEL SRRSSQTDNN RSSNFELSLS HHNNPSSNPS TRILHCPDRR NLYNNHILSG GSLHQRVDES
101: EINNIHRPIR GIPVYHNRSF PFHQQASPSS LPSLGGDFSI LNSSSGYNNA YRSFQSSPRL KGVPMHHHNH YGAVGSSDSS YPHHHNHHHH GMVRSRFLPK
201: MPTKRSMRAP RVRWTSSLHA RFVHAVELLG GHENGSGEEE MGINANERAQ SDDTSPHHQE IDFPSTQPRW SNSSGLLYQI LTKRTIEVHN VRATGSPDLI
301: SFENDLEFNI TAVSDMSCSN LRGIGNVLTG NPGFSDLKVA SLSSFGNYTC RNTTSGPTVN FKCNKCRLAN DYIYISWHFV DLPGAPAAAV GFQFNFTSKN
401: GADKKKHVSF VSGTLRNGSI LDERPVTFRG SEGNILKFNL FPRIYHHLGD LKLIQPLFHE FIPGSVYRET AQLQASLGRS ADGILNTTLF INYLSSYIVE
501: IDHENILGPV SFLADLGGLY CISIGIFFYI LVQCEYRIKK LRNEDTIFRR IRKRRKALDH WDKLRRYVAY TYDCRILGDD AIKTTKVSSA LCGLARPSTS
601: PSECGSSRTN MQHFIMSAKK PGLSIEKNVT PQPASLEMRP LDSASSLAPN TSNKKSISQS SHSNGDIIPP PPSMEFSEGS SSSEVDAVDI KKKLQLLYDY
701: NVLLREKLLD TQSLLNALGA KASSSSSTKE HST

Best Arabidopsis Sequence Match ( AT5G16520.1 )
(BLAST)

001: MACPRNSITY NATRCACGIG QLLNRSSGSC EIFGWPSTIS TDKDVNYSVI SFAETLFAFD RIRKFTQSQA IFLEATLVML LSWLVFCFFL RFTKLGDGRN
101: VWFNLRWWIT RLDVFFSTRH WLDDQQIVKK RKTELGGTFS VASWIVFIGL FAALLYQIIT KRTIEVHNVR ATGSPDLISF ENDLEFNITA VSDMSCSNLR
201: GIGNVVMGNP GFSEFKVAAL SSLGSYTCKN TTSGPTVNFK CTKCRLTNDY IYISWHFVDL PDSPAAAVGF QFNFTSKNGP NEKHMSFVSG TLRNGSILDE
301: SPVTFRGTEG NILKFNLFPR IYHHLHDLKL IQPLFHEFIP GSVYRDTTQL QASMGRSTDG ILNTTLFINY LSAYIVEIDH ENILGPVSFL ADLGGLYCIS
401: IGIFFYLLVQ CEYRIKKLRN EDTVFRKIRN RRKALDHWDK LRRYVAYTWD CSILVDDAIK TTKVSGMCGL TRPPTSSNSS EHGESIMANK KPNLGIEKNV
501: ISQPASLELS SFDSASSLAH GDNFSNKKSI THPISHSEDV SIPPPPPMEF IDGSSGSEVD AMDIKNKFQL LYDYNVLLRE KLLETQSLLN TLAPKPIASS
601: SSTVERSA

Arabidopsis Description

At5g16520 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.