Factsheet for Bra040176.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78794	Canola	nucleus	94.32	95.83
CDY68011	Canola	nucleus	63.41	95.26
Bra021038.1-P	Field mustard	plastid	47.0	83.24
AT4G17695.1	Thale cress	nucleus	76.66	75.47
Bra018498.1-P	Field mustard	mitochondrion	10.73	47.89
Bra023254.1-P	Field mustard	nucleus	41.96	36.34
Bra033844.1-P	Field mustard	nucleus	42.9	34.69
Bra008613.1-P	Field mustard	nucleus	28.08	30.58
VIT_18s0001g11390.t01	Wine grape	nucleus	30.6	29.48
KRH05752	Soybean	nucleus	30.6	29.31
PGSC0003DMT400030518	Potato	nucleus	27.13	27.92
Solyc04g079600.2.1	Tomato	nucleus	26.81	27.6
KRH51927	Soybean	nucleus	28.08	26.97
KRH61226	Soybean	nucleus	28.08	26.89
Bra023570.1-P	Field mustard	cytosol	30.6	24.37
Bra026202.1-P	Field mustard	nucleus	15.14	24.0
Bra029503.1-P	Field mustard	mitochondrion	12.3	22.67
Bra026618.1-P	Field mustard	nucleus	17.03	20.61
Bra026818.1-P	Field mustard	nucleus	15.14	20.0
Bra024836.1-P	Field mustard	nucleus	16.09	19.69
Bra005124.1-P	Field mustard	nucleus	16.72	15.73
Bra035311.1-P	Field mustard	nucleus	27.44	13.94
Bra017425.1-P	Field mustard	nucleus	8.2	13.13
Bra000180.1-P	Field mustard	nucleus	16.09	13.11
Bra004973.1-P	Field mustard	nucleus	15.14	11.79
Bra000270.1-P	Field mustard	nucleus	9.78	10.76
Bra006360.1-P	Field mustard	nucleus	22.4	9.69
Bra017021.1-P	Field mustard	nucleus	5.68	4.95

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra040176	EnsemblPlants:Bra040176.1	EnsemblPlants:Bra040176.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:M4FGE8	InterPro:Myb_dom_plants
PFAM:PF00249	PANTHER:PTHR31496	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002545CC9
SEG:seg	:	:	:	:	:

Description

AT4G17695 (E=7e-104) KAN3 | KAN3 (KANADI 3); DNA binding / transcription factor

Coordinates

chrA01:-:4493990..4497576

Molecular Weight (calculated)

36657.8 Da

IEP (calculated)

7.231

GRAVY (calculated)

-0.914

Length

317 amino acids

Sequence
(BLAST)

001: MELFPSQPDL YLKINRRREE QEEEDYKEQE EVQRRLLFGS KASDSDRKAS DHHIHTLQFT SNNEPTKIDH NQEHMESLHQ DLRSNFMVKP IRGIPLHQNQ
101: ILDHYYYSPT PPFFFSEVNG QHTNPSYSYN LHHRHHRQAQ PQAQRLTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD VQDLTLAHVK
201: SHLQMYRTIK STEKPTTSSD IGQSDTCENE LKLNSERQAR DLQGLWSNSS SEARFHLKAK ASGLDMSSNK NVDQRCPSYE RLSSDSSSLT GTRPEIETPN
301: LEFVSLNVSV DLLNIIT

Best Arabidopsis Sequence Match ( AT4G17695.1 )
(BLAST)

001: MELFPSQPDL YLKISRRREE EQEKESQELQ EQEVERRLGF QSKASDLDNK SSNNLIHTLQ FTSNNEATKI NSNQEHKESL DQDLRSIFMM RPIRGIPLYQ
101: NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD
201: VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT
301: GTRPETETPN LDFTLATPNL SP

Arabidopsis Description

KAN3Probable transcription factor KAN3 [Source:UniProtKB/Swiss-Prot;Acc:Q941I2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.