Factsheet for Bra035311.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02401	Canola	nucleus	99.84	99.84
CDY23916	Canola	nucleus	42.15	98.87
CDY69225	Canola	mitochondrion	24.68	93.33
AT5G42630.1	Thale cress	nucleus	34.29	77.54
Bra018498.1-P	Field mustard	mitochondrion	5.77	50.7
Solyc04g079600.2.1	Tomato	nucleus	18.11	36.69
PGSC0003DMT400030518	Potato	nucleus	17.79	36.04
Bra021038.1-P	Field mustard	plastid	10.26	35.75
VIT_18s0001g11390.t01	Wine grape	nucleus	17.79	33.74
KRH05752	Soybean	nucleus	17.63	33.23
KRH51927	Soybean	nucleus	15.54	29.39
KRH61226	Soybean	nucleus	15.06	28.4
Bra008613.1-P	Field mustard	nucleus	13.14	28.18
Bra023254.1-P	Field mustard	nucleus	16.51	28.14
Bra040176.1-P	Field mustard	nucleus	13.94	27.44
Bra033844.1-P	Field mustard	nucleus	16.51	26.28
Bra029503.1-P	Field mustard	mitochondrion	7.21	26.16
Bra023570.1-P	Field mustard	cytosol	14.42	22.61
Bra026202.1-P	Field mustard	nucleus	6.73	21.0
Bra026818.1-P	Field mustard	nucleus	6.89	17.92
Bra005124.1-P	Field mustard	nucleus	9.13	16.91
Bra026618.1-P	Field mustard	nucleus	7.05	16.79
Bra024836.1-P	Field mustard	nucleus	6.57	15.83
Bra000180.1-P	Field mustard	nucleus	9.13	14.65
Bra004973.1-P	Field mustard	nucleus	9.13	14.0
Bra000270.1-P	Field mustard	nucleus	5.13	11.11
Bra017425.1-P	Field mustard	nucleus	3.04	9.6
Bra006360.1-P	Field mustard	nucleus	10.9	9.28
Bra017021.1-P	Field mustard	nucleus	3.21	5.49

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra035311	EnsemblPlants:Bra035311.1	EnsemblPlants:Bra035311.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:M4F2L2	InterPro:Myb_dom_plants	PFAM:PF00249
PANTHER:PTHR31496	PANTHER:PTHR31496:SF12	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000253E5E4
SEG:seg	:	:	:	:	:

Description

AT5G42630 (E=4e-085) KAN4, ATS | ATS (ABERRANT TESTA SHAPE); DNA binding / transcription factor

Coordinates

chrScaffold000103:-:339317..345912

Molecular Weight (calculated)

70583.7 Da

IEP (calculated)

6.878

GRAVY (calculated)

-0.795

Length

624 amino acids

Sequence
(BLAST)

001: MIMFESRSSV RGSNSVPDLS LQISLPNSHA EKPLHGSERS FTTSSDSGSS LSELSHENSF LKKHLLSLGF DHHHPYHHHQ RHSSNMFQPQ IYGRDFKRTS
101: SSVVSLKRSI RAPRMRWTST LHAHFVHAVQ LLGGHERATP KSVLELMNVK DLTLAHVKSH LQMYRTVKCT DKRSSGERKV EKEAEQKTED NNNNNEDADA
201: DPISPNSSSV QKTQRSPWSS TKGVSMSISQ ADPHMEINRI TKDDVEKDHL SLEFTLGRPS WGIDHVGELR RWDQGRLIDP TRRTDELDGI AQSNSPNGRV
301: GRLARSNSPN GRVGRCILAS WTMGVFAVWD PLSEALCNLP RRLKEGEESS MDGFIQHKAP TERRGSRTRK EKHIAVDDDA SYREGFTEDI LGEYLNCGVP
401: IDLDELLGSD VPASEDGSGK GPKFTKASRM VNGGLLMMNQ ALDASSQEAR MAQFRAEMAD KKIALLRDEL ERSCRCEGEL TAKEIHRAYR RGKKEMDEVM
501: KNRRAQFSYE FGEFKESYQA LGAYRECCST VGGLYLMQAP DYSFAAENVT QIRHMKERYR DFALPQIEER IWKQWEPIPV SRDTVEAETR APDETGEVNQ
601: PSVPLNVNDY SVGGSMTEYY EFDG

Best Arabidopsis Sequence Match ( AT5G42630.1 )
(BLAST)

001: MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK
101: RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN
201: SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN LDFTLGRPSW GMEYAEPSSD LTLLKC

Arabidopsis Description

KAN4Probable transcription factor KAN4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.