Factsheet for Solyc05g051060.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017981	Potato	nucleus	89.79	67.64
Solyc06g066340.2.1	Tomato	nucleus	40.14	39.18
Solyc11g011770.1.1	Tomato	nucleus	60.92	37.45
GSMUA_Achr8P22900_001	Banana	nucleus	48.24	36.34
Solyc08g076400.2.1	Tomato	nucleus	28.87	31.18
Solyc08g005260.1.1	Tomato	nucleus	39.44	31.02
Solyc09g005030.1.1	Tomato	nucleus	15.14	29.45
Solyc04g079600.2.1	Tomato	nucleus	27.11	25.0
Solyc02g080860.1.1	Tomato	nucleus	18.31	20.55
Solyc12g006280.1.1	Tomato	nucleus	12.32	20.11
Solyc06g051060.2.1	Tomato	nucleus	17.25	19.29
Solyc10g076460.1.1	Tomato	nucleus	17.96	16.89
Solyc02g080730.1.1	Tomato	nucleus	14.79	15.56
Solyc04g008480.1.1	Tomato	nucleus	16.2	15.49
Solyc02g080740.1.1	Tomato	nucleus	14.79	15.16
Solyc02g080720.1.1	Tomato	nucleus	16.9	14.72
Solyc02g076670.2.1	Tomato	nucleus	17.25	14.5
Solyc03g006150.2.1	Tomato	extracellular, nucleus	15.49	14.33
Solyc02g080710.1.1	Tomato	nucleus	17.96	14.21
Solyc07g045000.2.1	Tomato	nucleus	6.69	10.8
Solyc02g080680.1.1	Tomato	mitochondrion	7.04	8.73

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0044212
InterPro:Homeobox-like_sf	UniProt:K4C1D8	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR31496	InterPro:SANT/Myb
SUPFAM:SSF46689	EnsemblPlantsGene:Solyc05g051060.2	EnsemblPlants:Solyc05g051060.2.1	TIGRFAMs:TIGR01557	UniParc:UPI0002767429	SEG:seg

Description

No Description!

Coordinates

chr5:-:61243187..61248660

Molecular Weight (calculated)

32153.5 Da

IEP (calculated)

8.466

GRAVY (calculated)

-0.697

Length

284 amino acids

Sequence
(BLAST)

001: MNSYHGVSLL DPIKGIPIYH HHQDPKRSSS FGSIYHNNLD HISYSNNSYV TNVASSSPYN RIPIVANRFQ NQQHIYYNGV GLLGSPSSHE SNNFLMRSRF
101: LPKFPTKRSM RAPRMRWTTS LHARFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKTT DKPAASSDGS GEEDLLAIDK ILDQRGPLDG
201: CDEPSTTLWS NSSSSRERLS QANFNESNGL IRSSSFPSQQ RFSHHIEECE YSRAMSYVGC SLDQKNPSLE FTLGRSDWVE KNHD

Best Arabidopsis Sequence Match ( AT5G16560.1 )
(BLAST)

001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK

Arabidopsis Description

KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.