Factsheet for VIT_00s0179g00350.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0026g00730.t01
VIT_02s0087g00270.t01
VIT_05s0094g01550.t01
VIT_07s0141g00610.t01
VIT_08s0056g00160.t01
VIT_11s0016g05420.t01
VIT_13s0067g02060.t01
VIT_14s0030g01680.t01
VIT_14s0066g01070.t01
VIT_14s0219g00290.t01
VIT_18s0001g10030.t01
VIT_18s0001g13060.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22960.1	VIT_18s0001g13060.t01	AT1G19680.1	21798944
AT3G22960.1	VIT_01s0026g00730.t01	AT1G60010.1	21798944
AT3G22960.1	VIT_02s0087g00270.t01	AT1G61590.1	21798944
AT3G22960.1	VIT_07s0141g00610.t01	AT2G30580.1	21798944
AT3G22960.1	VIT_14s0219g00290.t01	AT3G01690.1	21798944
AT3G22960.1	VIT_13s0067g02060.t01	AT3G56130.1	21798944
AT3G22960.1	VIT_05s0094g01550.t01	AT3G59920.1	21798944
AT3G22960.1	VIT_08s0056g00160.t01	AT3G60360.1	21798944
AT3G22960.1	VIT_18s0001g10030.t01	AT4G24240.1	21798944
AT3G22960.1	VIT_14s0030g01680.t01	AT5G04600.1	21798944
AT3G22960.1	VIT_14s0219g00290.t01	AT5G14390.1	21798944
AT3G22960.1	VIT_14s0066g01070.t01	AT5G14660.1	21798944
AT3G22960.1	VIT_11s0016g05420.t01	AT5G35410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16760_001	Banana	cytosol	23.9	85.53
GSMUA_Achr4P28510_001	Banana	cytosol	60.28	82.06
GSMUA_Achr2P17520_001	Banana	cytosol	59.93	81.58
GSMUA_Achr4P21110_001	Banana	cytosol	59.58	81.1
VIT_05s0020g04480.t01	Wine grape	plastid	73.64	71.5
Os07t0181000-01	Rice	plastid	70.3	71.3
TraesCS2D01G237900.1	Wheat	plastid	69.77	69.65
TraesCS2A01G240200.1	Wheat	plastid	69.77	69.65
Bra001896.1-P	Field mustard	plastid	69.07	69.56
Solyc09g082970.2.1	Tomato	plastid	72.06	69.14
CDY40829	Canola	plastid	69.6	68.63
EER95951	Sorghum	plastid	70.12	68.44
Zm00001d034443_P001	Maize	plastid	68.89	68.29
CDY35484	Canola	plastid	69.07	68.11
Bra023780.1-P	Field mustard	plastid	69.07	68.11
CDX92969	Canola	plastid	68.54	67.83
CDX94878	Canola	plastid	69.07	67.64
KXG37365	Sorghum	plastid	68.54	67.47
AT3G22960.1	Thale cress	plastid	69.95	66.78
HORVU2Hr1G050140.1	Barley	plastid	69.24	65.23
Zm00001d018961_P002	Maize	plastid	69.95	64.3
TraesCS2B01G257800.1	Wheat	plastid	68.89	63.53
VIT_03s0088g00410.t01	Wine grape	plastid	51.14	50.79
VIT_16s0050g02180.t01	Wine grape	plastid	39.72	39.24
VIT_02s0012g01170.t01	Wine grape	plastid	37.79	37.59
VIT_10s0071g01060.t01	Wine grape	cytosol	26.54	29.61
VIT_08s0056g00190.t01	Wine grape	cytosol	26.19	29.22
VIT_06s0004g00130.t01	Wine grape	cytosol	25.66	28.85
VIT_08s0007g07600.t01	Wine grape	cytosol, mitochondrion, plastid	25.31	28.8
VIT_08s0007g05490.t01	Wine grape	cytosol	21.79	25.15
VIT_08s0007g04170.t01	Wine grape	plastid	21.09	23.35
VIT_13s0074g00210.t01	Wine grape	cytosol, plastid	20.74	22.39
VIT_08s0007g05430.t01	Wine grape	endoplasmic reticulum, extracellular	5.45	17.71
VIT_16s0050g02660.t01	Wine grape	plastid	15.47	11.61

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	EntrezGene:100256253	wikigene:100256253	Gene3D:2.40.33.10
MapMan:3.12.8	Gene3D:3.20.20.60	Gene3D:3.40.1380.20	MapMan:5.1.2.1	ProteinID:CBI25062	ProteinID:CBI25062.3
UniProt:D7T3I1	EMBL:FN595511	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806	InterPro:IPR036918	EntrezGene:LOC100256253	wikigene:LOC100256253
PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	PANTHER:PTHR11817	PANTHER:PTHR11817:SF14	InterPro:Pyr_Knase
InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf
SUPFAM:SSF50800	SUPFAM:SSF51621	SUPFAM:SSF52935	TIGRFAMs:TIGR01064	UniParc:UPI00015CA9C0	ArrayExpress:VIT_00s0179g00350
EnsemblPlantsGene:VIT_00s0179g00350	EnsemblPlants:VIT_00s0179g00350.t01	unigene:Vvi.23144	RefSeq:XP_002280899	RefSeq:XP_002280899.1	SEG:seg

Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:D7T3I1]

Coordinates

chrUn:+:7577826..7585106

Molecular Weight (calculated)

62232.1 Da

IEP (calculated)

6.250

GRAVY (calculated)

-0.053

Length

569 amino acids

Sequence
(BLAST)

001: MAHALHFSIS LSPPPPPFLS KRLSSKPYAC SAGSPISSVH SVSPVSENRL PLSKAPAPVV LQPTTVDSGV MHLDVAMEVE LRENGPRSSR RTKLVCTIGP
101: ATCGLDELEA LAAGGMNVAR LNMCHGTREW HRTVIERVRW LNQVKGFSVS IMMDTEGSEV HMGDLGGLTS AKAEDGDIWT FSVRAFNSHR PECTISVNYD
201: GFAEDVKVGD ELLVDGGMVR FEVIDKIGPD VKCRCTDSGL LLPRANLTFW RNGSLVQARN AMLPTISSKD WLDIDFGIAE GVDFIAVSFV KSAEVIKQLK
301: SYIAGRSCES DVAVIAKIES FGSLKNLKEI IQASDGAMVA RGDLGAQIPL EEVPSIQEKI IRLCRQLNKP VIVASQLLKS MIEYPTPTRA EVADVSEAVK
401: QQADGLMLSG ESAMGQYPEK ALAVLRSVSL RIERWWREEK HNDNMELPDI ACTSLESVSE EICHAATKMA NKLEADALFV YTKTGHMASL LSRCRPDCPV
501: FAFTPSPSSQ RRLNLHWGLI PFCLSFTNDM ESNLDRSFSL LKARGMIKSG DLIISVSDML QSVQVVNVP

Best Arabidopsis Sequence Match ( AT3G22960.1 )
(BLAST)

001: MSQSIQFSTP SHTPHLLHLP HSQFNRPLSS ISFRRFPLTT IKYTSIRASS SSSPSPDLDS SSSSSSSQVL LSPNGTGAVK SDERSVVATA VTTDTSGIEV
101: DTVTEAELKE NGFRSTRRTK LICTIGPATC GFEQLEALAV GGMNVARLNM CHGTRDWHRG VIRSVRRLNE EKGFAVAIMM DTEGSEIHMG DLGGEASAKA
201: EDGEVWTFTV RAFDSSRPER TISVSYDGFA EDVRVGDELL VDGGMVRFEV IEKIGPDVKC LCTDPGLLLP RANLTFWRDG SLVRERNAML PTISSKDWLD
301: IDFGIAEGVD FIAVSFVKSA EVINHLKSYL AARSRGGEIG VIAKIESIDS LTNLEEIILA SDGAMVARGD LGAQIPLEQV PAAQQRIVQV CRALNKPVIV
401: ASQLLESMIE YPTPTRAEVA DVSEAVRQRS DALMLSGESA MGQFPDKALT VLRTVSLRIE RWWREEKRHE SVPLQAIGSS FSDKISEEIC NSAAKMANNL
501: GVDAVFVYTT SGHMASLVSR CRPDCPIFAF TTTTSVRRRL NLQWGLIPFR LSFSDDMESN LNKTFSLLKS RGMIKSGDLV IAVSDMLQSI QVMNVP

Arabidopsis Description

PKP1Plastidial pyruvate kinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.