CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90021
EER96686
EER98346
EES00516
EES03332
EES03779
EES18242
KXG19676
KXG22017
KXG30786
KXG34111
KXG37592
KXG37982
OQU79022
OQU79520
OQU80418
OQU80443
OQU86641
OQU92552

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22960.1	EES00516	AT1G19680.1	21798944
AT3G22960.1	OQU86641	AT1G19680.1	21798944
AT3G22960.1	EER96686	AT1G60010.1	21798944
AT3G22960.1	KXG19676	AT1G60010.1	21798944
AT3G22960.1	KXG30786	AT1G60010.1	21798944
AT3G22960.1	OQU80443	AT1G60010.1	21798944
AT3G22960.1	OQU92552	AT1G61590.1	21798944
AT3G22960.1	KXG37592	AT2G30580.1	21798944
AT3G22960.1	KXG37982	AT2G30580.1	21798944
AT3G22960.1	OQU79520	AT2G30580.1	21798944
AT3G22960.1	OQU79022	AT3G01690.1	21798944
AT3G22960.1	EER98346	AT3G59920.1	21798944
AT3G22960.1	EES18242	AT3G59920.1	21798944
AT3G22960.1	KXG22017	AT3G59920.1	21798944
AT3G22960.1	EES03779	AT3G60360.1	21798944
AT3G22960.1	KXG34111	AT5G04600.1	21798944
AT3G22960.1	OQU80418	AT5G04600.1	21798944
AT3G22960.1	OQU79022	AT5G14390.1	21798944
AT3G22960.1	EES03332	AT5G14660.1	21798944
AT3G22960.1	EER90021	AT5G35410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P28510_001	Banana	cytosol	63.46	88.52
GSMUA_Achr4P21110_001	Banana	cytosol	63.46	88.52
Zm00001d018961_P002	Maize	plastid	93.48	88.05
KRG92440	Soybean	cytosol, nucleus	67.58	86.78
Os07t0181000-01	Rice	plastid	81.99	85.2
KRH34357	Soybean	nucleus	68.78	84.42
KXG37365	Sorghum	plastid	80.45	81.14
Bra001896.1-P	Field mustard	plastid	74.44	76.81
VIT_05s0020g04480.t01	Wine grape	plastid	76.67	76.28
CDY40829	Canola	plastid	75.3	76.08
Bra023780.1-P	Field mustard	plastid	75.13	75.91
CDY35484	Canola	plastid	75.13	75.91
CDX92969	Canola	plastid	73.76	74.78
CDX94878	Canola	plastid	73.93	74.18
AT3G22960.1	Thale cress	plastid	75.47	73.83
Solyc09g082970.2.1	Tomato	plastid	74.44	73.19
VIT_00s0179g00350.t01	Wine grape	plastid	68.44	70.12
EER91093	Sorghum	plastid	53.34	57.38
EES03378	Sorghum	plastid	38.77	38.97
EER94457	Sorghum	plastid	37.91	38.91
EES13103	Sorghum	cytosol	25.73	29.24
EER92334	Sorghum	cytosol	25.73	28.96
EES02767	Sorghum	cytosol	24.36	27.9
EES09257	Sorghum	cytosol, peroxisome, plastid	22.47	24.86
KXG22956	Sorghum	cytosol, peroxisome, plastid	22.13	24.48
EES09641	Sorghum	cytosol	21.78	24.1

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	MapMan:3.12.8	Gene3D:3.20.20.60
Gene3D:3.40.1380.20	MapMan:5.1.2.1	EntrezGene:8060743	UniProt:C5XB26	EnsemblPlants:EER95951	ProteinID:EER95951
ProteinID:EER95951.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0030955	InterPro:IPR015806	InterPro:IPR036918	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050
ScanProsite:PS00110	PANTHER:PTHR11817	PANTHER:PTHR11817:SF14	MetaCyc:PWY-1042	MetaCyc:PWY-2221	MetaCyc:PWY-5484
MetaCyc:PWY-5723	MetaCyc:PWY-6142	MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003	MetaCyc:PWY-7218
MetaCyc:PWY-7383	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_AS	InterPro:Pyrv_Knase_C
InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	EnsemblPlantsGene:SORBI_3002G054400	SUPFAM:SSF50800	SUPFAM:SSF51621
SUPFAM:SSF52935	unigene:Sbi.265	TIGRFAMs:TIGR01064	UniParc:UPI0001A83010	RefSeq:XP_002459430.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:5219183..5223489

Molecular Weight (calculated)

63703.6 Da

IEP (calculated)

6.991

GRAVY (calculated)

-0.116

Length

583 amino acids

Sequence
(BLAST)

001: MAAAAAAASS LLHVPAARRA SAAAARSPLS QPPAPTPLFI RLRARRPHRL PLRLRSTSPT AASDLTAFPP PSPTGIFASD PHPPIDVDAA TEAELRENGF
101: RSTRRTKLVC TVGPATSSPD QLEALAVGGM NVARLNMCHG DREWHRDAIR AVRRLNDEKG FAVAVMMDTE GSEIHMGDLG GASSVKAEDG EVWTFSVRSF
201: ELPLPERTIN VNYDGFAEDV RVGDELLVDG GMARFEVIEK IGPDVKCRCT DPGLLLPRAN LTFWRDGSIV RERNAMLPTI SSKDWLDIDF GIAEGVDFIA
301: VSFVKSAEVI KHLKSYIAAR GRGSDLAVIA KIESIDSLKN LEEIIRASDG AMVARGDMGA QVPLEQVPSI QQKIVQLCRQ LNKPVIVASQ LLESMIEYPT
401: PTRAEVADVS EAVRQRADAL MLSGESAMGR YPDKALSVLR SVSLRIEKWW REEKRHEALE LQSVSSSFSD KISEEICNSA AKMANGLGVD AVFVFTKTGH
501: MASLLSRCRP DCPVFAFTTS TSVRRRLNLQ WGLIPFRLSF SDDMESNLNR TFSLLKARGM IQSGDLVIAL SDMLQSIQVM NVP

Best Arabidopsis Sequence Match ( AT3G22960.1 )
(BLAST)

001: MSQSIQFSTP SHTPHLLHLP HSQFNRPLSS ISFRRFPLTT IKYTSIRASS SSSPSPDLDS SSSSSSSQVL LSPNGTGAVK SDERSVVATA VTTDTSGIEV
101: DTVTEAELKE NGFRSTRRTK LICTIGPATC GFEQLEALAV GGMNVARLNM CHGTRDWHRG VIRSVRRLNE EKGFAVAIMM DTEGSEIHMG DLGGEASAKA
201: EDGEVWTFTV RAFDSSRPER TISVSYDGFA EDVRVGDELL VDGGMVRFEV IEKIGPDVKC LCTDPGLLLP RANLTFWRDG SLVRERNAML PTISSKDWLD
301: IDFGIAEGVD FIAVSFVKSA EVINHLKSYL AARSRGGEIG VIAKIESIDS LTNLEEIILA SDGAMVARGD LGAQIPLEQV PAAQQRIVQV CRALNKPVIV
401: ASQLLESMIE YPTPTRAEVA DVSEAVRQRS DALMLSGESA MGQFPDKALT VLRTVSLRIE RWWREEKRHE SVPLQAIGSS FSDKISEEIC NSAAKMANNL
501: GVDAVFVYTT SGHMASLVSR CRPDCPIFAF TTTTSVRRRL NLQWGLIPFR LSFSDDMESN LNKTFSLLKS RGMIKSGDLV IAVSDMLQSI QVMNVP

Arabidopsis Description

PKP1Plastidial pyruvate kinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.