CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033405_P003	Maize	plastid	95.76	95.76
Os03t0672300-01	Rice	plastid	88.75	87.77
TraesCS4D01G018900.1	Wheat	plastid	85.79	86.27
TraesCS4B01G021300.1	Wheat	plastid	85.24	85.24
HORVU4Hr1G003290.2	Barley	mitochondrion	85.61	81.98
VIT_03s0088g00410.t01	Wine grape	plastid	65.87	62.3
KRH35631	Soybean	plastid	63.65	59.28
KRG91145	Soybean	plastid	63.47	59.11
PGSC0003DMT400066112	Potato	plastid	60.15	56.7
Solyc01g106780.2.1	Tomato	cytosol, plastid	60.15	56.7
KXG37365	Sorghum	plastid	57.93	54.33
EER95951	Sorghum	plastid	57.38	53.34
EER94457	Sorghum	plastid	36.35	34.68
EES03378	Sorghum	plastid	36.35	33.97
EES13103	Sorghum	cytosol	27.12	28.66
EES02767	Sorghum	cytosol	26.01	27.7
EER92334	Sorghum	cytosol	26.38	27.61
EES09641	Sorghum	cytosol	23.43	24.1
KXG22956	Sorghum	cytosol, peroxisome, plastid	21.77	22.39
EES09257	Sorghum	cytosol, peroxisome, plastid	21.59	22.2

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	MapMan:3.12.8	Gene3D:3.20.20.60
Gene3D:3.40.1380.20	MapMan:5.1.2.1	EntrezGene:8056731	UniProt:C5WPQ9	EnsemblPlants:EER91093	ProteinID:EER91093
ProteinID:EER91093.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806
InterPro:IPR036918	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	PANTHER:PTHR11817	PANTHER:PTHR11817:SF21
MetaCyc:PWY-1042	MetaCyc:PWY-2221	MetaCyc:PWY-5484	MetaCyc:PWY-5723	MetaCyc:PWY-6142	MetaCyc:PWY-6886
MetaCyc:PWY-6901	MetaCyc:PWY-7003	MetaCyc:PWY-7218	MetaCyc:PWY-7383	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom
InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	EnsemblPlantsGene:SORBI_3001G140700
SUPFAM:SSF50800	SUPFAM:SSF51621	SUPFAM:SSF52935	TIGRFAMs:TIGR01064	UniParc:UPI0001A81FAE	RefSeq:XP_002464095.1

Description

hypothetical protein

Coordinates

chr1:+:11223555..11230626

Molecular Weight (calculated)

59491.6 Da

IEP (calculated)

7.009

GRAVY (calculated)

-0.127

Length

542 amino acids

Sequence
(BLAST)

001: MAASTRTTSS FPYLVAASSP AARRHGASHR IRASVGEAAM DVVSEAELRE KGFMGMRKTK LVCTVGPACV EALPALARGG MGVARVNLCH GGREWHRAAM
101: RAVRRLNEEE GFCVTLMVDT EGSQLLVADH GGATSAKAED GSEWIFTNRR ADEAHQFTMH VNFDKFSEGI LVGDELVIDG GMATFEVNEK IGNDLRCKCT
201: DPGLLLPRAK LSFWRNGKLV QRNFGLPTLS TKDWADIEFG IAEGVDCIAL SFVNDANDIK QLKAYLSRRS LEHIKVFAKI ESLESLKNLK DIIEASDGVM
301: VARGDLGVQI PLEQIPAIQE SIVKLCRHLN KPVIVASQLL ESMVEYPTPT RAEVADVSEA VRQYADAVMI SAESAIGAYP QKALSVLRVA SERMESWSRE
401: ENMHKRLPQH QLAIALPDRI SEQICNCAVE MANNLAVDAI FVYTKHGHMA SLLSRNRPNP PIFAFTDNAN SRKSMNLYWG VIPLHLPLSN SMEDNFNKTI
501: SLMKSKGSVK PGDTVLVVSD SDLNRPCAAT SVFQSIQVRL VE

Best Arabidopsis Sequence Match ( AT3G22960.1 )
(BLAST)

001: MSQSIQFSTP SHTPHLLHLP HSQFNRPLSS ISFRRFPLTT IKYTSIRASS SSSPSPDLDS SSSSSSSQVL LSPNGTGAVK SDERSVVATA VTTDTSGIEV
101: DTVTEAELKE NGFRSTRRTK LICTIGPATC GFEQLEALAV GGMNVARLNM CHGTRDWHRG VIRSVRRLNE EKGFAVAIMM DTEGSEIHMG DLGGEASAKA
201: EDGEVWTFTV RAFDSSRPER TISVSYDGFA EDVRVGDELL VDGGMVRFEV IEKIGPDVKC LCTDPGLLLP RANLTFWRDG SLVRERNAML PTISSKDWLD
301: IDFGIAEGVD FIAVSFVKSA EVINHLKSYL AARSRGGEIG VIAKIESIDS LTNLEEIILA SDGAMVARGD LGAQIPLEQV PAAQQRIVQV CRALNKPVIV
401: ASQLLESMIE YPTPTRAEVA DVSEAVRQRS DALMLSGESA MGQFPDKALT VLRTVSLRIE RWWREEKRHE SVPLQAIGSS FSDKISEEIC NSAAKMANNL
501: GVDAVFVYTT SGHMASLVSR CRPDCPIFAF TTTTSVRRRL NLQWGLIPFR LSFSDDMESN LNKTFSLLKS RGMIKSGDLV IAVSDMLQSI QVMNVP

Arabidopsis Description

PKP1Plastidial pyruvate kinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.