CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 5
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU85630

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36580.1	OQU85630	AT1G63970.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023379_P001	Maize	extracellular, plasma membrane	98.48	98.48
EES09257	Sorghum	cytosol, peroxisome, plastid	96.77	96.77
Os11t0148500-02	Rice	plasma membrane	95.64	95.64
TraesCS5D01G138800.1	Wheat	cytosol	94.69	94.69
TraesCS5A01G131100.1	Wheat	golgi	94.69	94.69
TraesCS5B01G131000.1	Wheat	golgi, unclear	94.5	94.5
Os12t0145700-01	Rice	plasma membrane	94.31	94.31
HORVU5Hr1G041120.7	Barley	cytosol	94.5	94.14
VIT_08s0007g04170.t01	Wine grape	plastid	87.48	89.69
KRH20011	Soybean	nucleus	89.56	89.56
KRH32634	Soybean	endoplasmic reticulum	89.37	89.37
GSMUA_Achr10P...	Banana	cytosol	88.8	88.8
KRH67815	Soybean	cytosol, endoplasmic reticulum	88.24	88.24
GSMUA_Achr11P...	Banana	plastid	85.77	87.94
Solyc10g083720.1.1	Tomato	plastid	87.48	87.48
PGSC0003DMT400072411	Potato	cytosol	82.73	87.37
AT3G52990.1	Thale cress	cytosol, plastid	87.29	87.29
Bra028545.1-P	Field mustard	cytosol, plastid	87.29	87.29
CDX73585	Canola	cytosol, plastid	87.1	87.1
CDY13321	Canola	cytosol, plastid	87.1	87.1
Bra006965.1-P	Field mustard	cytosol, plastid	86.91	86.91
Bra019634.1-P	Field mustard	cytosol, plastid	86.91	86.91
CDX67554	Canola	cytosol, plastid	86.91	86.91
CDX78139	Canola	cytosol, plastid	86.91	86.91
CDX76243	Canola	cytosol, plastid	86.72	86.72
CDY58286	Canola	cytosol, plastid	86.72	86.72
GSMUA_Achr6P13430_001	Banana	cytosol	86.91	86.58
AT2G36580.1	Thale cress	cytosol, peroxisome, plastid	86.34	86.34
Solyc09g008840.2.1	Tomato	unclear	86.15	86.15
KRG96114	Soybean	cytosol	88.42	85.98
PGSC0003DMT400006945	Potato	mitochondrion	80.83	85.37
KRH57945	Soybean	cytosol, endoplasmic reticulum	30.36	83.33
GSMUA_Achr2P20210_001	Banana	plastid	86.34	83.33
KRH57981	Soybean	cytosol	37.95	66.01
EES09641	Sorghum	cytosol	60.53	60.53
EES13103	Sorghum	cytosol	40.04	41.13
EES02767	Sorghum	cytosol	39.09	40.47
EER92334	Sorghum	cytosol	38.71	39.38
EES03378	Sorghum	plastid	24.86	22.59
EER94457	Sorghum	plastid	24.29	22.54
EER95951	Sorghum	plastid	24.48	22.13
EER91093	Sorghum	plastid	22.39	21.77
KXG37365	Sorghum	plastid	23.34	21.28

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	Gene3D:3.20.20.60	Gene3D:3.40.1380.20
MapMan:50.2.7	UniProt:A0A1B6PB54	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743
GO:GO:0005488	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806	InterPro:IPR036918	EnsemblPlants:KXG22956	ProteinID:KXG22956
ProteinID:KXG22956.1	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	PANTHER:PTHR11817	PANTHER:PTHR11817:SF38
MetaCyc:PWY-1042	MetaCyc:PWY-2221	MetaCyc:PWY-5484	MetaCyc:PWY-5723	MetaCyc:PWY-6142	MetaCyc:PWY-6886
MetaCyc:PWY-6901	MetaCyc:PWY-7003	MetaCyc:PWY-7218	MetaCyc:PWY-7383	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom
InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	EnsemblPlantsGene:SORBI_3008G033600
SUPFAM:SSF50800	SUPFAM:SSF51621	SUPFAM:SSF52935	TIGRFAMs:TIGR01064	UniParc:UPI0002207160	:

Description

hypothetical protein

Coordinates

chr8:-:3060049..3064960

Molecular Weight (calculated)

57350.2 Da

IEP (calculated)

7.155

GRAVY (calculated)

0.005

Length

527 amino acids

Sequence
(BLAST)

001: MHSTNLLLEE PIRMASILEP SKTSFFPAMT KIVGTLGPKS RSVDTISSCL KAGMSVARFD FSWGDAAYHQ ETLENLKLAI KSTKKLCAVM LDTVGPELQV
101: VNKSETPISL EENGTVVLTP HQGQEATSTL LPINFSGLAK AVTPGATIFV GQYLFTGSET TSVWLEVSEV KGDDVVCIIK NTATLAGSLF TLHCSQIHID
201: LPTLSHEDKD VIKKWGAPNK IDFLSLSYTR HAEDVRQARE YLSKLGDLSQ TQIFAKIENV EGLNHFDEIL AEADGIILSR GNLGIDLPPE KVFLFQKSAL
301: HKCNMAGKPA VVTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI STVGRICAEA EKVFNQDLYY KRTVKYVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PNMPVLSVVI PRLKTNQLRW SFTGAFEARQ SLIVRGLFPM LADPRHPAES TSATNESVLK VALDHGKASG
501: VIKSHDRVVV CQKVGDSSVV KIIELDD

Best Arabidopsis Sequence Match ( AT3G52990.1 )
(BLAST)

001: MHSSHLLLEE PIRMASILEP SKSSFFPALT KIVGTLGPKS RSVEALSGCL KAGMSVARFD FSWGDADYHQ ETLDNLKVAV RSTKKLCAVM LDTVGPELQV
101: INKSEKAITL KADGLVTLTP NQDQEASSEV LPINFNGLAK AVKKGDTIFV GQYLFTGSET TSVWLEVDEV KGDDVICLSR NAATLAGSLF TLHSSQVHID
201: LPTLTEKDKE VISTWGVQNK IDFLSLSYCR HAEDVRQTRE MLKKLGDLSQ TQIFAKIENV EGLTHFDEIL QEADGIILSR GNLGIDLPPE KVFLFQKAAL
301: YKCNMAGKPA VLTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI STVGRICAEA EKVFNQDLYF KKTVKYVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PTMPVISVVI PRVKTNQLKW SFSGAFEARQ SLIVRGLFPM LADPRHPAES TSATNESVLK VALDHGKHAG
501: VIKSHDRVVV CQKVGDASVV KIIELED

Arabidopsis Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:Q94KE3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.