Factsheet for Os12t0145700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 5
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

plasma membrane: 18260611
plasma membrane: 18557835
plastid: 27992503

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0680600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36580.1	Os02t0680600-01	AT1G63970.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0148500-02	Rice	plasma membrane	96.39	96.39
Zm00001d023379_P001	Maize	extracellular, plasma membrane	94.31	94.31
KXG22956	Sorghum	cytosol, peroxisome, plastid	94.31	94.31
EES09257	Sorghum	cytosol, peroxisome, plastid	94.31	94.31
Zm00001d052494_P001	Maize	plasma membrane	93.74	93.74
TraesCS5D01G138800.1	Wheat	cytosol	93.17	93.17
TraesCS5A01G131100.1	Wheat	golgi	93.17	93.17
TraesCS5B01G131000.1	Wheat	golgi, unclear	92.98	92.98
HORVU5Hr1G041120.7	Barley	cytosol	92.79	92.44
VIT_08s0007g04170.t01	Wine grape	plastid	87.86	90.08
KRH32634	Soybean	endoplasmic reticulum	89.56	89.56
KRH20011	Soybean	nucleus	89.56	89.56
KRH67815	Soybean	cytosol, endoplasmic reticulum	89.18	89.18
GSMUA_Achr10P...	Banana	cytosol	88.8	88.8
PGSC0003DMT400072411	Potato	cytosol	84.06	88.78
Solyc10g083720.1.1	Tomato	plastid	88.61	88.61
CDY58286	Canola	cytosol, plastid	88.24	88.24
GSMUA_Achr11P...	Banana	plastid	85.96	88.13
Bra019634.1-P	Field mustard	cytosol, plastid	88.05	88.05
CDX76243	Canola	cytosol, plastid	87.86	87.86
AT3G52990.1	Thale cress	cytosol, plastid	87.48	87.48
Bra028545.1-P	Field mustard	cytosol, plastid	87.48	87.48
CDY13321	Canola	cytosol, plastid	87.48	87.48
CDX73585	Canola	cytosol, plastid	87.29	87.29
Solyc09g008840.2.1	Tomato	unclear	87.29	87.29
Bra006965.1-P	Field mustard	cytosol, plastid	87.1	87.1
CDX67554	Canola	cytosol, plastid	87.1	87.1
CDX78139	Canola	cytosol, plastid	87.1	87.1
GSMUA_Achr6P13430_001	Banana	cytosol	86.91	86.58
KRG96114	Soybean	cytosol	88.8	86.35
PGSC0003DMT400006945	Potato	mitochondrion	81.59	86.17
AT2G36580.1	Thale cress	cytosol, peroxisome, plastid	86.15	86.15
KRH57945	Soybean	cytosol, endoplasmic reticulum	30.93	84.9
GSMUA_Achr2P20210_001	Banana	plastid	85.77	82.78
KRH57981	Soybean	cytosol	38.33	66.67
Os11t0216000-01	Rice	cytoskeleton, cytosol, peroxisome	60.91	60.91
Os04t0677500-01	Rice	cytosol	40.99	42.27
Os01t0276700-02	Rice	cytosol	40.42	41.76
Os03t0325000-00	Rice	cytosol	29.79	36.34
Os01t0660300-01	Rice	plastid	16.51	23.71
Os10t0571200-01	Rice	plastid	24.29	22.46
Os07t0181000-01	Rice	plastid	23.72	22.28
Os03t0672300-01	Rice	plastid	22.39	21.53

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	Gene3D:3.20.20.60	Gene3D:3.40.1380.20
EntrezGene:4351493	MapMan:50.2.7	ProteinID:ABA96474.1	EMBL:AK071391	ProteinID:BAF29167.1	ProteinID:BAT15880.1
ProteinID:EEE52764.1	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674	GO:GO:0003682	GO:GO:0003824
GO:GO:0004722	GO:GO:0004743	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016787
GO:GO:0019538	GO:GO:0030955	GO:GO:0046872	InterPro:IPR015806	InterPro:IPR036918	EnsemblPlantsGene:Os12g0145700
EnsemblPlants:Os12t0145700-01	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	PANTHER:PTHR11817	PANTHER:PTHR11817:SF38
InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl
InterPro:Pyrv_Knase_insert_dom_sf	UniProt:Q2QXR8	SUPFAM:SSF50800	SUPFAM:SSF51621	SUPFAM:SSF52935	TIGRFAMs:TIGR01064
UniParc:UPI0000681A53	RefSeq:XP_015620584.1	:	:	:	:

Description

Pyruvate kinase family protein. (Os12t0145700-01)

Coordinates

chr12:-:2245552..2249823

Molecular Weight (calculated)

57445.4 Da

IEP (calculated)

6.737

GRAVY (calculated)

0.004

Length

527 amino acids

Sequence
(BLAST)

001: MHSTNLLLEE PIRMASILEP SKPSFFPAMT KIVGTLGPKS RSVDTISSCL KAGMSVARFD FSWGDAEYHQ ETLENLKVAI KSTKKLCAVM LDTVGPELQV
101: VNKSEASISL EENGTVILTP DQGQEASSQV LPINFAGLAK AVKPGDTIFV GQYLFTGSET TSVWLEVSQI KGDDVVCVIK NTATLAGSLF TLHCSQIHID
201: LPTLSDEDKE VIRKWGAPNK IDFLSLSYTR HVEDVRQARE FLSKLGDLSQ TQIFAKIENV EGLNNFDEIL QEADGIILSR GNLGIDLPPE KVFLFQKSAL
301: HKCNMAGKPA VVTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI SIVGKICAEA EKVFNQDLYF KRTVKHVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PTMPVLSVVI PRLKTNQLRW SFTGAFEARQ SLIVRGLFPM LADPRHPAES TNATNESVLK VALDHGKVSG
501: VIKSHDRVVV CQKVGDSSVV KIIELDD

Best Arabidopsis Sequence Match ( AT3G52990.1 )
(BLAST)

001: MHSSHLLLEE PIRMASILEP SKSSFFPALT KIVGTLGPKS RSVEALSGCL KAGMSVARFD FSWGDADYHQ ETLDNLKVAV RSTKKLCAVM LDTVGPELQV
101: INKSEKAITL KADGLVTLTP NQDQEASSEV LPINFNGLAK AVKKGDTIFV GQYLFTGSET TSVWLEVDEV KGDDVICLSR NAATLAGSLF TLHSSQVHID
201: LPTLTEKDKE VISTWGVQNK IDFLSLSYCR HAEDVRQTRE MLKKLGDLSQ TQIFAKIENV EGLTHFDEIL QEADGIILSR GNLGIDLPPE KVFLFQKAAL
301: YKCNMAGKPA VLTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI STVGRICAEA EKVFNQDLYF KKTVKYVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PTMPVISVVI PRVKTNQLKW SFSGAFEARQ SLIVRGLFPM LADPRHPAES TSATNESVLK VALDHGKHAG
501: VIKSHDRVVV CQKVGDASVV KIIELED

Arabidopsis Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:Q94KE3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.