CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35631	Soybean	plastid	95.7	95.7
VIT_03s0088g00410.t01	Wine grape	plastid	69.07	70.16
PGSC0003DMT400066112	Potato	plastid	65.98	66.78
Solyc01g106780.2.1	Tomato	cytosol, plastid	65.81	66.61
Zm00001d033405_P003	Maize	plastid	59.62	64.02
EER91093	Sorghum	plastid	59.11	63.47
Os03t0672300-01	Rice	plastid	58.93	62.59
TraesCS4B01G021300.1	Wheat	plastid	57.56	61.81
TraesCS4D01G018900.1	Wheat	plastid	57.22	61.78
HORVU4Hr1G003290.2	Barley	mitochondrion	57.39	59.01
KRG92440	Soybean	cytosol, nucleus	45.88	58.81
KRH34357	Soybean	nucleus	47.25	57.89
KRH38304	Soybean	cytosol	23.54	39.6
KRH70138	Soybean	cytosol	6.36	38.14
KRH44705	Soybean	cytosol	12.71	37.76
KRH28271	Soybean	cytosol	16.67	37.31
KRH77227	Soybean	plastid	34.19	36.51
KRH18451	Soybean	cytosol	15.29	34.9
KRG91615	Soybean	nucleus	33.33	33.74
KRH35201	Soybean	plastid	33.16	33.39
KRH08770	Soybean	nucleus, plastid	32.82	33.1
KRG89466	Soybean	endoplasmic reticulum, nucleus	25.43	29.48
KRH50504	Soybean	mitochondrion	25.26	29.34
KRG93166	Soybean	cytosol	25.09	28.63
KRH56500	Soybean	nucleus	24.91	28.38
KRH08482	Soybean	cytosol	23.88	27.04
KRH32634	Soybean	endoplasmic reticulum	22.16	24.48
KRH20011	Soybean	nucleus	21.99	24.29
KRH67815	Soybean	cytosol, endoplasmic reticulum	21.99	24.29
KRH38305	Soybean	plastid	9.45	23.91
KRG92070	Soybean	endoplasmic reticulum, nucleus	21.31	23.57
KRG96114	Soybean	cytosol	21.82	23.43
KRH34711	Soybean	endoplasmic reticulum	21.13	23.38
KRH70137	Soybean	cytosol, endoplasmic reticulum	16.32	23.11
KRH24949	Soybean	cytosol, peroxisome, plastid	21.31	23.09
KRH71733	Soybean	cytosol	5.33	22.14
KRH57945	Soybean	cytosol, endoplasmic reticulum	7.22	21.88
KRH57981	Soybean	cytosol	10.48	20.13
KRH71730	Soybean	endoplasmic reticulum	6.53	19.69

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	EntrezGene:100780644	Gene3D:2.40.33.10	MapMan:3.12.8
Gene3D:3.20.20.60	Gene3D:3.40.1380.20	MapMan:5.1.2.1	EMBL:ACUP02012663	EnsemblPlantsGene:GLYMA_20G136200	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0030955	UniProt:I1NG47	InterPro:IPR015806	InterPro:IPR036918
EnsemblPlants:KRG91145	ProteinID:KRG91145	ProteinID:KRG91145.1	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050
ScanProsite:PS00110	PANTHER:PTHR11817	PANTHER:PTHR11817:SF21	MetaCyc:PWY-1042	MetaCyc:PWY-2221	MetaCyc:PWY-5484
MetaCyc:PWY-5723	MetaCyc:PWY-6142	MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003	MetaCyc:PWY-7218
MetaCyc:PWY-7383	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_AS	InterPro:Pyrv_Knase_C
InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621	SUPFAM:SSF52935
TIGRFAMs:TIGR01064	UniParc:UPI00018DFC90	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:37579176..37583501

Molecular Weight (calculated)

63653.4 Da

IEP (calculated)

5.702

GRAVY (calculated)

-0.072

Length

582 amino acids

Sequence
(BLAST)

001: MVLKSMVASA SDLSLVSVAG NPPLDLKNRV FGSRVISLGF RFNKGSKWKG NERFNFKVRA AVEVGVERSK SKALEGGFGL DVVSEAELTV KGFAGLRKTK
101: LVCTVGPACS SMEDLENLAL GGMSVARLNM CHGTREWHRD VIRKIKKLNE EKGFCVSVMI DTEGSQIHVV DHGAPSSVKV EEGSNWVFTA EHYEGSRPFT
201: VQTNYRGFSE GTEVGDELVI DGGMACFEVT EKTGNDLHCK CIDAGLFLPG AKFSFWRDGK LVRGNNKLPT LSTKDWADID FGIAEGVDFF ALSFVNHADS
301: VKDLKMYLST KSTKSIKVLA KIESLESLHK LEEIVQASDG IMVARGDLGV EIPLEQIPTV QEDIIYVCRQ LNKPVIVASQ LLESMVEYPT PTRAEVADVS
401: EAVRQYADAL MLSGESAIGS YGRKALAVLD MASSRMESWS REENRQSLVS HHQLGESLPE CITEQICNCA VEMANNLGVD AIFVYTKYGH MASLLSRNRP
501: NPPIFAFTND DSTRMALTLQ WGVVPILVDL SDDAESNISK SVQLMKSRGL ISQGDVVLVV SDVAPTRASP MAFQSIQVKT II

Best Arabidopsis Sequence Match ( AT3G22960.1 )
(BLAST)

001: MSQSIQFSTP SHTPHLLHLP HSQFNRPLSS ISFRRFPLTT IKYTSIRASS SSSPSPDLDS SSSSSSSQVL LSPNGTGAVK SDERSVVATA VTTDTSGIEV
101: DTVTEAELKE NGFRSTRRTK LICTIGPATC GFEQLEALAV GGMNVARLNM CHGTRDWHRG VIRSVRRLNE EKGFAVAIMM DTEGSEIHMG DLGGEASAKA
201: EDGEVWTFTV RAFDSSRPER TISVSYDGFA EDVRVGDELL VDGGMVRFEV IEKIGPDVKC LCTDPGLLLP RANLTFWRDG SLVRERNAML PTISSKDWLD
301: IDFGIAEGVD FIAVSFVKSA EVINHLKSYL AARSRGGEIG VIAKIESIDS LTNLEEIILA SDGAMVARGD LGAQIPLEQV PAAQQRIVQV CRALNKPVIV
401: ASQLLESMIE YPTPTRAEVA DVSEAVRQRS DALMLSGESA MGQFPDKALT VLRTVSLRIE RWWREEKRHE SVPLQAIGSS FSDKISEEIC NSAAKMANNL
501: GVDAVFVYTT SGHMASLVSR CRPDCPIFAF TTTTSVRRRL NLQWGLIPFR LSFSDDMESN LNKTFSLLKS RGMIKSGDLV IAVSDMLQSI QVMNVP

Arabidopsis Description

PKP1Plastidial pyruvate kinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.