CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38304	Soybean	cytosol	58.93	98.27
KRH38305	Soybean	plastid	35.7	89.57
KRG91615	Soybean	nucleus	87.52	87.83
KRH35201	Soybean	plastid	87.35	87.2
KRH44705	Soybean	cytosol	29.46	86.73
VIT_16s0050g02180.t01	Wine grape	plastid	84.06	84.2
Solyc03g007810.2.1	Tomato	plastid	83.36	83.22
PGSC0003DMT400016844	Potato	plastid	83.19	83.05
Bra003095.1-P	Field mustard	mitochondrion	52.86	82.66
KRH18451	Soybean	cytosol	36.4	82.35
AT5G52920.1	Thale cress	plastid	81.28	81.0
CDY60911	Canola	plastid	80.59	80.17
CDY66652	Canola	plastid	80.42	80.0
Os01t0660300-01	Rice	plastid	50.78	79.84
CDY19645	Canola	plastid	80.24	79.69
Zm00001d043986_P005	Maize	plastid	78.51	78.51
EES03378	Sorghum	plastid	78.34	77.93
TraesCS3A01G239300.1	Wheat	plastid	77.3	77.3
TraesCS3D01G239500.1	Wheat	plastid	77.12	77.12
TraesCS3B01G267800.2	Wheat	plastid	76.95	76.95
Bra022618.1-P	Field mustard	plastid	80.59	76.73
Bra040933.1-P	Field mustard	plastid	80.59	76.73
GSMUA_Achr7P24720_001	Banana	plastid	77.99	74.63
HORVU3Hr1G059470.7	Barley	plastid	74.18	73.67
KRH77227	Soybean	plastid	63.43	67.16
KRH28271	Soybean	cytosol	27.56	61.15
KRH24949	Soybean	cytosol, peroxisome, plastid	46.79	50.28
KRH70138	Soybean	cytosol	7.45	44.33
KRG92440	Soybean	cytosol, nucleus	34.49	43.83
KRH34357	Soybean	nucleus	35.36	42.95
KRH56500	Soybean	nucleus	30.33	34.25
KRG93166	Soybean	cytosol	30.16	34.12
KRG89466	Soybean	endoplasmic reticulum, nucleus	29.64	34.06
KRH50504	Soybean	mitochondrion	29.46	33.93
KRH08482	Soybean	cytosol	30.16	33.85
KRH35631	Soybean	plastid	33.62	33.33
KRG91145	Soybean	plastid	33.1	32.82
KRH71733	Soybean	cytosol	7.11	29.29
KRH70137	Soybean	cytosol, endoplasmic reticulum	20.1	28.22
KRG92070	Soybean	endoplasmic reticulum, nucleus	22.88	25.1
KRH34711	Soybean	endoplasmic reticulum	22.7	24.9
KRH20011	Soybean	nucleus	22.7	24.86
KRH32634	Soybean	endoplasmic reticulum	22.53	24.67
KRH67815	Soybean	cytosol, endoplasmic reticulum	22.36	24.48
KRG96114	Soybean	cytosol	22.53	23.99
KRH57945	Soybean	cytosol, endoplasmic reticulum	7.63	22.92
KRH57981	Soybean	cytosol	11.61	22.11
KRH71730	Soybean	endoplasmic reticulum	6.59	19.69

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	EntrezGene:100815822	Gene3D:2.40.33.10	MapMan:3.12.8
Gene3D:3.20.20.60	Gene3D:3.40.1380.20	MapMan:5.1.2.1	EMBL:ACUP02010203	EnsemblPlantsGene:GLYMA_16G173100	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030955	UniProt:I1MPC6
InterPro:IPR015806	InterPro:IPR036918	EnsemblPlants:KRH08770	ProteinID:KRH08770	ProteinID:KRH08770.1	PFAM:PF00224
PFAM:PF02887	PRINTS:PR01050	ScanProsite:PS00110	PANTHER:PTHR11817	PANTHER:PTHR11817:SF2	MetaCyc:PWY-1042
MetaCyc:PWY-2221	MetaCyc:PWY-5484	MetaCyc:PWY-5723	MetaCyc:PWY-6142	MetaCyc:PWY-6886	MetaCyc:PWY-6901
MetaCyc:PWY-7003	MetaCyc:PWY-7218	MetaCyc:PWY-7383	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf
InterPro:Pyrv_Knase_AS	InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800
SUPFAM:SSF51621	SUPFAM:SSF52935	UniParc:UPI000233AA8C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr16:-:33369053..33375030

Molecular Weight (calculated)

63680.9 Da

IEP (calculated)

6.984

GRAVY (calculated)

-0.219

Length

577 amino acids

Sequence
(BLAST)

001: MAQVVASRSI QSTPLCPTSG SARDRTQNLL KPPSFASKVF PLGENNNKRS KLRLRSLQIS ARKSAPSEVI PMSPEDDPKI EEHLQHLRGV QPFGENSVGM
101: WSKPTFRRKT KIVCTIGPST NTREMIWKLA EAGMNVARLN MSHGDHASHQ KVIDLVKEYN ASHEDNVIAI MLDTKGPEVR SGDLPQPITL MPGQEFTFTI
201: QRGVGTADCV SVNYDDFVND VEMGDMLLVD GGMMSMVVKS KTEDSVKCEV VDGGELKSRR HLNVRGKSAT LPSITEKDWD DIKFGVDNKV DFYAVSFVKD
301: AEVVHELKNY LKSCGADIHV IVKIESADSI PNLHSIITAS DGAMVARGDL GAELPIEEVP LLQEEIINLC RSMGKAVIVA TNMLESMIVH PTPTRAEVSD
401: IAIAVREGSD GIMLSGETAH GKFPLKAVQV MHTVALRTEA TIPGGKMPPN IGQVLKNHMS EMFAYHATMM SNTLGTSTVV FTRTGFMAVL LSHYRPSGTI
501: FAFTDEKRVQ QRLALYQGVC PIYMEFCDDS EATFRRALDL LQKQAMVKEG EEVALVQSGR QPIWRFQSTH NIQVRKV

Best Arabidopsis Sequence Match ( AT5G52920.1 )
(BLAST)

001: MAQVVATRSI QGSMLSPNGG SVSTRSEKLL KPASFAVKVL GNEAKRSGRV SVRSRRVVDT TVRSARVETE VIPVSPEDVP NREEQLERLL EMQQFGDTSV
101: GMWSKPTVRR KTKIVCTVGP STNTREMIWK LAEAGMNVAR MNMSHGDHAS HKKVIDLVKE YNAQTKDNTI AIMLDTKGPE VRSGDLPQPI MLDPGQEFTF
201: TIERGVSTPS CVSVNYDDFV NDVEAGDMLL VDGGMMSFMV KSKTKDSVKC EVVDGGELKS RRHLNVRGKS ATLPSITEKD WEDIKFGVEN KVDFYAVSFV
301: KDAQVVHELK KYLQNSGADI HVIVKIESAD SIPNLHSIIT ASDGAMVARG DLGAELPIEE VPILQEEIIN LCRSMGKAVI VATNMLESMI VHPTPTRAEV
401: SDIAIAVREG ADAVMLSGET AHGKFPLKAA GVMHTVALRT EATITSGEMP PNLGQAFKNH MSEMFAYHAT MMSNTLGTST VVFTRTGFMA ILLSHYRPSG
501: TIYAFTNEKK IQQRLALYQG VCPIYMEFTD DAEETFANAL ATLLKQGMVK KGEEIAIVQS GTQPIWRSQS THNIQVRKV

Arabidopsis Description

PKP2Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178U9G2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.