Factsheet for Bra001896.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003395.1-P
Bra003754.1-P
Bra007218.1-P
Bra007493.1-P
Bra007528.1-P
Bra008196.1-P
Bra008747.1-P
Bra008761.1-P
Bra009050.1-P
Bra009440.1-P
Bra013779.1-P
Bra014494.1-P
Bra014523.1-P
Bra018304.1-P
Bra019239.1-P
Bra021651.1-P
Bra022807.1-P
Bra023463.1-P
Bra025613.1-P
Bra027820.1-P
Bra028783.1-P
Bra031421.1-P
Bra035410.1-P
Bra038591.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22960.1	Bra003754.1-P	AT1G19680.1	21798944
AT3G22960.1	Bra008196.1-P	AT1G19680.1	21798944
AT3G22960.1	Bra027820.1-P	AT1G60010.1	21798944
AT3G22960.1	Bra035410.1-P	AT1G60010.1	21798944
AT3G22960.1	Bra031421.1-P	AT1G61590.1	21798944
AT3G22960.1	Bra038591.1-P	AT1G61590.1	21798944
AT3G22960.1	Bra018304.1-P	AT2G30580.1	21798944
AT3G22960.1	Bra021651.1-P	AT2G30580.1	21798944
AT3G22960.1	Bra022807.1-P	AT2G30580.1	21798944
AT3G22960.1	Bra007218.1-P	AT3G56130.1	21798944
AT3G22960.1	Bra003395.1-P	AT3G59920.1	21798944
AT3G22960.1	Bra007493.1-P	AT3G59920.1	21798944
AT3G22960.1	Bra014523.1-P	AT3G59920.1	21798944
AT3G22960.1	Bra007528.1-P	AT3G60360.1	21798944
AT3G22960.1	Bra014494.1-P	AT3G60360.1	21798944
AT3G22960.1	Bra013779.1-P	AT4G24240.1	21798944
AT3G22960.1	Bra019239.1-P	AT4G24240.1	21798944
AT3G22960.1	Bra009440.1-P	AT5G04600.1	21798944
AT3G22960.1	Bra028783.1-P	AT5G04600.1	21798944
AT3G22960.1	Bra009050.1-P	AT5G10210.1	21798944
AT3G22960.1	Bra008761.1-P	AT5G14390.1	21798944
AT3G22960.1	Bra023463.1-P	AT5G14390.1	21798944
AT3G22960.1	Bra008747.1-P	AT5G14660.1	21798944
AT3G22960.1	Bra025613.1-P	AT5G35410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92969	Canola	plastid	99.29	97.57
CDX94878	Canola	plastid	98.23	95.53
Bra023780.1-P	Field mustard	plastid	92.04	90.12
AT3G22960.1	Thale cress	plastid	94.34	89.43
GSMUA_Achr2P17520_001	Banana	cytosol	64.6	87.32
KRG92440	Soybean	cytosol, nucleus	70.09	87.22
GSMUA_Achr7P16760_001	Banana	cytosol	24.25	86.16
GSMUA_Achr4P21110_001	Banana	cytosol	62.83	84.93
KRH34357	Soybean	nucleus	71.33	84.84
GSMUA_Achr4P28510_001	Banana	cytosol	62.3	84.21
VIT_05s0020g04480.t01	Wine grape	plastid	80.89	77.99
Solyc09g082970.2.1	Tomato	plastid	79.82	76.05
Os07t0181000-01	Rice	plastid	75.22	75.76
Zm00001d034443_P001	Maize	plastid	76.11	74.91
EER95951	Sorghum	plastid	76.81	74.44
TraesCS2D01G237900.1	Wheat	plastid	74.87	74.21
TraesCS2A01G240200.1	Wheat	plastid	74.69	74.04
KXG37365	Sorghum	plastid	75.58	73.88
Zm00001d018961_P002	Maize	plastid	76.99	70.27
HORVU2Hr1G050140.1	Barley	plastid	74.16	69.37
VIT_00s0179g00350.t01	Wine grape	plastid	69.56	69.07
TraesCS2B01G257800.1	Wheat	plastid	73.27	67.1
Bra003095.1-P	Field mustard	mitochondrion	29.56	45.26
Bra010164.1-P	Field mustard	plastid	38.58	38.18
Bra040933.1-P	Field mustard	plastid	39.82	37.13
Bra022618.1-P	Field mustard	plastid	39.82	37.13
Bra009818.1-P	Field mustard	mitochondrion	13.27	32.75
Bra007286.1-P	Field mustard	cytosol, mitochondrion	24.6	30.75
Bra009352.1-P	Field mustard	cytosol	27.61	30.59
Bra006008.1-P	Field mustard	cytosol	27.26	30.2
Bra028934.1-P	Field mustard	cytosol, mitochondrion, plastid	24.96	30.0
Bra002822.1-P	Field mustard	cytosol	26.37	29.92
Bra001095.1-P	Field mustard	cytosol	26.02	29.88
Bra036411.1-P	Field mustard	cytosol	25.84	29.67
Bra038654.1-P	Field mustard	cytosol	26.73	29.61
Bra031951.1-P	Field mustard	cytosol	25.66	29.59
Bra037750.1-P	Field mustard	cytosol	26.37	29.22
Bra019634.1-P	Field mustard	cytosol, plastid	23.01	24.67
Bra006965.1-P	Field mustard	cytosol, plastid	22.48	24.1
Bra028545.1-P	Field mustard	cytosol, plastid	22.3	23.91
Bra029936.1-P	Field mustard	endoplasmic reticulum, vacuole	16.99	12.44

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	MapMan:3.12.8	Gene3D:3.20.20.60
Gene3D:3.40.1380.20	MapMan:5.1.2.1	EnsemblPlantsGene:Bra001896	EnsemblPlants:Bra001896.1	EnsemblPlants:Bra001896.1-P	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806
InterPro:IPR036918	UniProt:M4CCG6	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	ScanProsite:PS00110
PANTHER:PTHR11817	PANTHER:PTHR11817:SF14	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_AS
InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621
SUPFAM:SSF52935	TIGRFAMs:TIGR01064	UniParc:UPI000254073C	SEG:seg	:	:

Description

AT3G22960 (E=6e-270) PKP1, PKP-ALPHA | PKP-ALPHA; pyruvate kinase

Coordinates

chrA03:+:19189556..19192793

Molecular Weight (calculated)

62253.6 Da

IEP (calculated)

5.744

GRAVY (calculated)

-0.118

Length

565 amino acids

Sequence
(BLAST)

001: MSQSIQFSTP SRTPHLLHLP HSRFHRPLTS LSFRQFPLKY TSIRASSSPE ERSVVATAVS TDTAAIDVDT VTEAELKENG FRSTRRTKLI CTIGPATCGF
101: EQLEALAEGG MNVARLNMCH GTREWHRDVI RSVRKLNEEK GFAVAIMMDT EGSEIHMGDL GGGESSAKSE DGEVWTFTVR AFDSSRPART ISVSYDGFAE
201: DVRVGDELLV DGGMVRFEVI EKIGPDVKCL CTDPGLLLPR ANLTFWRDGS LVRERNAMLP TISSKDWLDI DFGIAEGVDF IAVSFVKSAE VINHLKSYLA
301: ARSCGGDIGV IAKIESIDSL TNLEEIILAS DGAMVARGDL GAQIPLEQVP AAQQRIVKVC RALNKPVIVA SQLLESMIEY PTPTRAEVAD VSEAVRQRSD
401: ALMLSGESAM GQFPDKALTV LRSVSLRIER WWREEKRYES TPLQPIGSGF SDRISEEICN SAAKMANNLG VDAVFVYTKD GHMASLVSRC RPDCPIFAFT
501: TTTSVRRRLN LQWGLIPFRL SFSEDMESNL NKTFSLLKSR GMIKSGDLVI AVSDMLQSIQ VMNVP

Best Arabidopsis Sequence Match ( AT3G22960.1 )
(BLAST)

001: MSQSIQFSTP SHTPHLLHLP HSQFNRPLSS ISFRRFPLTT IKYTSIRASS SSSPSPDLDS SSSSSSSQVL LSPNGTGAVK SDERSVVATA VTTDTSGIEV
101: DTVTEAELKE NGFRSTRRTK LICTIGPATC GFEQLEALAV GGMNVARLNM CHGTRDWHRG VIRSVRRLNE EKGFAVAIMM DTEGSEIHMG DLGGEASAKA
201: EDGEVWTFTV RAFDSSRPER TISVSYDGFA EDVRVGDELL VDGGMVRFEV IEKIGPDVKC LCTDPGLLLP RANLTFWRDG SLVRERNAML PTISSKDWLD
301: IDFGIAEGVD FIAVSFVKSA EVINHLKSYL AARSRGGEIG VIAKIESIDS LTNLEEIILA SDGAMVARGD LGAQIPLEQV PAAQQRIVQV CRALNKPVIV
401: ASQLLESMIE YPTPTRAEVA DVSEAVRQRS DALMLSGESA MGQFPDKALT VLRTVSLRIE RWWREEKRHE SVPLQAIGSS FSDKISEEIC NSAAKMANNL
501: GVDAVFVYTT SGHMASLVSR CRPDCPIFAF TTTTSVRRRL NLQWGLIPFR LSFSDDMESN LNKTFSLLKS RGMIKSGDLV IAVSDMLQSI QVMNVP

Arabidopsis Description

PKP1Plastidial pyruvate kinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.