Factsheet for Bra007218.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27243	Canola	plastid	99.63	99.63
AT3G56130.1	Thale cress	plastid	73.33	70.46
KRG97672	Soybean	endoplasmic reticulum	50.37	46.74
VIT_13s0067g02060.t01	Wine grape	plastid	47.41	44.44
PGSC0003DMT400061547	Potato	plastid	47.41	44.29
Solyc06g050590.2.1	Tomato	plastid	47.41	44.14
KRH31200	Soybean	mitochondrion	47.78	43.43
GSMUA_Achr1P26670_001	Banana	mitochondrion, plastid	44.07	43.12
GSMUA_Achr8P33740_001	Banana	plastid	40.74	39.57
GSMUA_Achr9P16490_001	Banana	plastid	41.48	39.3
Bra027217.1-P	Field mustard	plastid	25.93	26.52
Bra021128.1-P	Field mustard	plastid	23.7	25.7

Protein Annotations

Gene3D:2.40.50.100	MapMan:5.1.3.3	InterPro:Biotin_lipoyl	EnsemblPlantsGene:Bra007218	EnsemblPlants:Bra007218.1	EnsemblPlants:Bra007218.1-P
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0045717
InterPro:IPR000089	UniProt:M4CSM6	PFAM:PF00364	SUPFAM:SSF51230	InterPro:Single_hybrid_motif	UniParc:UPI0002542B1B
SEG:seg	:	:	:	:	:

Description

AT3G56130 (E=6e-099) | biotin/lipoyl attachment domain-containing protein

Coordinates

chrA09:+:28044861..28046680

Molecular Weight (calculated)

28618.8 Da

IEP (calculated)

8.066

GRAVY (calculated)

-0.385

Length

270 amino acids

Sequence
(BLAST)

001: MESSAALGSL RQSLGSAVNV HSLSGNWSPS GNSCVPRWSL FNRNMLVLRA DSSKSSTTTT KTDESSDASN GTKTKTVRRT TFPKEVEALV HEMCDETEVG
101: DFEMNLKRKI GLAETPIPVP DISPSVAPPI PSEPMNKSVS ASADASPSKA KPASEKVSPF INAAYRKSSK LAALEAAGSN NYVLVTSPSV GKFQRSRTVK
201: GKKQGPTCKE GDAIKEGQVI GYLHQLGKEL PVTSDVAGEV LKLLSDDGDS VGYGEPLVAV LPSFHDINIQ

Best Arabidopsis Sequence Match ( AT3G56130.1 )
(BLAST)

001: MASSAALGSL HQTLGSAINS QSEVHSLSGN WSASGNSCVP RWRLSNRNSN YRLVLRAKAA KSSTTTISDG SSDASVSDGK KTVRRITFPK EVEALVHEMC
101: DETEVAVLQL KVGDFEMNLK RKIGAATNPI PVADISPTVA PPIPSEPMNK SASSAPSPSQ AKPSSEKVSP FKNTSYGKPA KLAALEASGS TNYVLVTSPA
201: VGKFQRSRTV KGKKQSPSCK EGDAIKEGQV IGYLHQLGTE LPVTSDVAGE VLKLLSDDGD SVGYGDPLVA VLPSFHDINI Q

Arabidopsis Description

AT3g56130/F18O21_90 [Source:UniProtKB/TrEMBL;Acc:Q93W03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.