CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007218.1-P	Field mustard	plastid	99.63	99.63
CDX72171	Canola	plastid	84.07	87.98
AT3G56130.1	Thale cress	plastid	72.96	70.11
KRG97672	Soybean	endoplasmic reticulum	50.37	46.74
VIT_13s0067g02060.t01	Wine grape	plastid	47.41	44.44
PGSC0003DMT400061547	Potato	plastid	47.41	44.29
Solyc06g050590.2.1	Tomato	plastid	47.41	44.14
KRH31200	Soybean	mitochondrion	47.78	43.43
GSMUA_Achr1P26670_001	Banana	mitochondrion, plastid	44.07	43.12
GSMUA_Achr8P33740_001	Banana	plastid	40.74	39.57
GSMUA_Achr9P16490_001	Banana	plastid	41.48	39.3
CDY20144	Canola	plastid	23.7	25.7
CDY21861	Canola	plastid	23.33	24.8
CDY30096	Canola	plastid	23.33	24.8
CDX97694	Canola	plastid	22.59	24.11

Protein Annotations

EnsemblPlants:CDY27243	EnsemblPlantsGene:GSBRNA2T00037117001	Gene3D:2.40.50.100	InterPro:Biotin_lipoyl	InterPro:IPR000089	InterPro:Single_hybrid_motif
PFAM:PF00364	ProteinID:CDY27243	ProteinID:CDY27243.1	SEG:seg	SUPFAM:SSF51230	UniParc:UPI0004EDD1EA
UniProt:A0A078GRH2	MapMan:5.1.3.3	:	:	:	:

Description

BnaA09g35590DBnaA09g35590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRH2]

Coordinates

chrLK032201:-:317278..319397

Molecular Weight (calculated)

28590.7 Da

IEP (calculated)

8.066

GRAVY (calculated)

-0.394

Length

270 amino acids

Sequence
(BLAST)

001: MESSAALGSL RQSLGSAVNV HSLSGNWSPS GNSCAPRWSL FNRNMLVLRA DSSKSSTTTT KTDESSDASN GTKTKTVRRT TFPKEVEALV HEMCDETEVG
101: DFEMNLKRKI GLAETPIPVP DISPSVAPPI PSEPMNKSVS ASADASPSKA KPASEKVSPF INAAYRKSSK LAALEAAGSN NYVLVTSPSV GKFQRSRTVK
201: GKKQGPTCKE GDAIKEGQVI GYLHQLGKEL PVTSDVAGEV LKLLSDDGDS VGYGEPLVAV LPSFHDINIQ

Best Arabidopsis Sequence Match ( AT3G56130.1 )
(BLAST)

001: MASSAALGSL HQTLGSAINS QSEVHSLSGN WSASGNSCVP RWRLSNRNSN YRLVLRAKAA KSSTTTISDG SSDASVSDGK KTVRRITFPK EVEALVHEMC
101: DETEVAVLQL KVGDFEMNLK RKIGAATNPI PVADISPTVA PPIPSEPMNK SASSAPSPSQ AKPSSEKVSP FKNTSYGKPA KLAALEASGS TNYVLVTSPA
201: VGKFQRSRTV KGKKQSPSCK EGDAIKEGQV IGYLHQLGTE LPVTSDVAGE VLKLLSDDGD SVGYGDPLVA VLPSFHDINI Q

Arabidopsis Description

AT3g56130/F18O21_90 [Source:UniProtKB/TrEMBL;Acc:Q93W03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.