CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30096	Canola	plastid	94.07	93.7
Bra027217.1-P	Field mustard	plastid	94.86	90.91
CDY20144	Canola	plastid	83.4	84.74
CDY21861	Canola	plastid	82.21	81.89
AT3G15690.2	Thale cress	plastid	77.08	74.14
VIT_09s0002g06120.t01	Wine grape	plastid	52.17	48.18
KRH09764	Soybean	plastid	45.85	43.12
PGSC0003DMT400073476	Potato	plastid	45.85	42.34
Solyc06g068010.2.1	Tomato	plastid	45.85	42.34
KRH23555	Soybean	plasma membrane	46.64	39.6
CDX72171	Canola	plastid	24.11	23.64
CDY27243	Canola	plastid	24.11	22.59

Protein Annotations

EnsemblPlants:CDX97694	EnsemblPlantsGene:GSBRNA2T00104942001	Gene3D:2.40.50.100	InterPro:Biotin_lipoyl	InterPro:IPR000089	InterPro:Single_hybrid_motif
PANTHER:PTHR43416	PANTHER:PTHR43416:SF4	PFAM:PF00364	ProteinID:CDX97694	ProteinID:CDX97694.1	SEG:seg
SUPFAM:SSF51230	UniParc:UPI0004EED8F1	MapMan:5.1.3.3	:	:	:

Description

BnaA05g23850D

Coordinates

chrLK031900:+:1024479..1026733

Molecular Weight (calculated)

26850.1 Da

IEP (calculated)

8.191

GRAVY (calculated)

-0.055

Length

253 amino acids

Sequence
(BLAST)

001: MASCSLAVPK IKISAAVDLS LVRSGRFQIP CNQRVLLIGQ RPVKYLSLRA TLGSVQASTV TAAESAATVE VEDTETTKPS PLNAQLVPKP SEVEALVTEI
101: CDSSSIAEFE LKLGGFRLYV ARNLADNNSS PPQPQPIPAA VAASATTESV DSNGSASSTS LAITKPTSSA ADQGLVILQS PKVGFFRRSK TIKGKRTPSS
201: CKEKDQVKEG QVLCYIEQLG GQFPIESDVT GEVVKILRED GGKSFFLLFF NLS

Best Arabidopsis Sequence Match ( AT3G15690.1 )
(BLAST)

001: MASCSLGVPK IKISAVDLSR VRSGSLLIPY NQRSLLRQRP VKYLSLKTTF GSVKAVQVST VPTAETSATI EVKDSKEIKS SRLNAQLVPK PSEVEALVTE
101: ICDSSSIAEF ELKLGGFRLY VARNIADNSS LQPPPTPAVT ASNATTESPE SNGSASSTSL AISKPASSAA DQGLMILQSP KVGFFRRSKT IKGKRLPSSC
201: KEKDQVKEGQ ILCYIEQLGG QFPIESDVTG EVVKILREDG GKACRIQ

Arabidopsis Description

Putative acetyl-CoA carboxylase biotin-containing subunit [Source:UniProtKB/TrEMBL;Acc:Q8GRT9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.