CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
plastid 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09764	Soybean	plastid	79.87	88.48
VIT_09s0002g06120.t01	Wine grape	plastid	53.36	58.03
PGSC0003DMT400073476	Potato	plastid	49.33	53.65
Solyc06g068010.2.1	Tomato	plastid	48.66	52.92
AT3G15690.2	Thale cress	plastid	46.31	52.47
Bra027217.1-P	Field mustard	plastid	45.64	51.52
Bra021128.1-P	Field mustard	plastid	40.27	48.19
CDY20144	Canola	plastid	40.27	48.19
CDY30096	Canola	plastid	40.27	47.24
CDY21861	Canola	plastid	39.93	46.85
AT1G52670.1	Thale cress	plastid	42.95	46.72
CDX97694	Canola	plastid	39.6	46.64
KRH31200	Soybean	mitochondrion	29.53	29.63
KRG97672	Soybean	endoplasmic reticulum	28.19	28.87

Protein Annotations

EMBL:ACUP02008474	EnsemblPlants:KRH23555	EnsemblPlantsGene:GLYMA_13G363500	EntrezGene:100782296	Gene3D:2.40.50.100	InterPro:Biotin_lipoyl
InterPro:IPR000089	InterPro:Single_hybrid_motif	PANTHER:PTHR43416	PANTHER:PTHR43416:SF4	PFAM:PF00364	ProteinID:KRH23555
ProteinID:KRH23555.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51230	UniParc:UPI000233B6B2	UniProt:I1M5S0
MapMan:5.1.3.3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:45029159..45033598

Molecular Weight (calculated)

32439.2 Da

IEP (calculated)

8.372

GRAVY (calculated)

-0.020

Length

298 amino acids

Sequence
(BLAST)

001: MLFTFFTSLP FTLLCDTHSF CFTFSMASCS IGTPNIKVLN LHFGGKKVGL SRQFGTRSWI SRLQYTSLVM SRQTVRFLAS SNGPSTEIQF AARSEGSEEI
101: RSSGLTSELI PNINEVEFLL TKLCDTSSIG ELDLKLAGFH LHVVRDLTEK TKTLPPLIPA SVSIINVTET PKTNGSVPTT SLAVSKPVDP VPSSGSIQRF
201: LDKAADEGLV IIQSPKVGFF RRSRTIKGKR APPSCKEKQN VEEGQVICYI EQLGGELPIE SDVSGEVIKI LRQDGDPVGY GDALVAILPS FPGIKKLQ

Best Arabidopsis Sequence Match ( AT3G15690.2 )
(BLAST)

001: MASCSLGVPK IKISAVDLSR VRSGSLLIPY NQRSLLRQRP VKYLSLKTTF GSVKAVQVST VPTAETSATI EVKDSKEIKS SRLNAQLVPK PSEVEALVTE
101: ICDSSSIAEF ELKLGGFRLY VARNIADNSS LQPPPTPAVT ASNATTESPE SNGSASSTSL AISKPASSAA DQGLMILQSP KVGFFRRSKT IKGKRLPSSC
201: KEKDQVKEGQ ILCYIEQLGG QFPIESDVTG EVVKILREDG EPVGYNDALI SILPSFPGIK KLQ

Arabidopsis Description

Putative acetyl-CoA carboxylase biotin-containing subunit [Source:UniProtKB/TrEMBL;Acc:Q8GRT9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.