CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97694	Canola	plastid	93.7	94.07
Bra027217.1-P	Field mustard	plastid	91.73	88.26
CDY20144	Canola	plastid	84.25	85.94
CDY21861	Canola	plastid	83.07	83.07
AT3G15690.2	Thale cress	plastid	78.74	76.05
VIT_09s0002g06120.t01	Wine grape	plastid	53.94	50.0
KRH09764	Soybean	plastid	46.46	43.87
PGSC0003DMT400073476	Potato	plastid	46.46	43.07
Solyc06g068010.2.1	Tomato	plastid	46.46	43.07
KRH23555	Soybean	plasma membrane	47.24	40.27
CDX72171	Canola	plastid	24.41	24.03
CDY27243	Canola	plastid	24.8	23.33

Protein Annotations

EnsemblPlants:CDY30096	EnsemblPlantsGene:GSBRNA2T00044654001	Gene3D:2.40.50.100	InterPro:Biotin_lipoyl	InterPro:IPR000089	InterPro:Single_hybrid_motif
PANTHER:PTHR43416	PANTHER:PTHR43416:SF4	PFAM:PF00364	ProteinID:CDY30096	ProteinID:CDY30096.1	SEG:seg
SUPFAM:SSF51230	UniParc:UPI0004EEC658	UniProt:A0A078GX60	MapMan:5.1.3.3	:	:

Description

BnaC05g37660DBnaC05g37660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GX60]

Coordinates

chrLK032249:+:32737..35002

Molecular Weight (calculated)

26803.1 Da

IEP (calculated)

8.190

GRAVY (calculated)

-0.078

Length

254 amino acids

Sequence
(BLAST)

001: MASCSLGVPK IKISAVDLSR VRSGSLQIPC NQRVLIGQRP VKYLSLRATL GSVKAPQAST VTAAESAATV EVEDAEMTKP SPLNAQLVPK PSEVEALVTE
101: ICDSSSIAEF ELKLGGFRLY VATNLADNNS SPPQPQPIPA AVAASATTEG VDSNGSASST SLAITKPTSS AADQGLVILQ SPKVGFFRRS KTIKGKRTPS
201: SCKEKDQVKE GQVLCYIEQL GGQFPIESDV TGEVVKILRE DGGKSFFLLF FNLS

Best Arabidopsis Sequence Match ( AT3G15690.1 )
(BLAST)

001: MASCSLGVPK IKISAVDLSR VRSGSLLIPY NQRSLLRQRP VKYLSLKTTF GSVKAVQVST VPTAETSATI EVKDSKEIKS SRLNAQLVPK PSEVEALVTE
101: ICDSSSIAEF ELKLGGFRLY VARNIADNSS LQPPPTPAVT ASNATTESPE SNGSASSTSL AISKPASSAA DQGLMILQSP KVGFFRRSKT IKGKRLPSSC
201: KEKDQVKEGQ ILCYIEQLGG QFPIESDVTG EVVKILREDG GKACRIQ

Arabidopsis Description

Putative acetyl-CoA carboxylase biotin-containing subunit [Source:UniProtKB/TrEMBL;Acc:Q8GRT9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.