CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23555	Soybean	plasma membrane	88.48	79.87
VIT_09s0002g06120.t01	Wine grape	plastid	57.25	56.2
PGSC0003DMT400073476	Potato	plastid	53.9	52.92
Solyc06g068010.2.1	Tomato	plastid	53.16	52.19
AT3G15690.2	Thale cress	plastid	50.19	51.33
Bra027217.1-P	Field mustard	plastid	49.81	50.76
Bra021128.1-P	Field mustard	plastid	43.87	47.39
CDY20144	Canola	plastid	43.87	47.39
CDY30096	Canola	plastid	43.87	46.46
CDX97694	Canola	plastid	43.12	45.85
CDY21861	Canola	plastid	42.75	45.28
AT1G52670.1	Thale cress	plastid	46.1	45.26
KRG97672	Soybean	endoplasmic reticulum	30.11	27.84
KRH31200	Soybean	mitochondrion	30.48	27.61

Protein Annotations

EMBL:ACUP02009109	EnsemblPlants:KRH09764	EnsemblPlantsGene:GLYMA_15G010300	EntrezGene:100782864	Gene3D:2.40.50.100	InterPro:Biotin_lipoyl
InterPro:IPR000089	InterPro:Single_hybrid_motif	PANTHER:PTHR43416	PANTHER:PTHR43416:SF4	PFAM:PF00364	ProteinID:KRH09764
ProteinID:KRH09764.1	SUPFAM:SSF51230	UniParc:UPI0001BA93CD	UniProt:I1MCI0	MapMan:5.1.3.3	:

Description

hypothetical protein

Coordinates

chr15:-:789395..793808

Molecular Weight (calculated)

29163.2 Da

IEP (calculated)

8.913

GRAVY (calculated)

-0.173

Length

269 amino acids

Sequence
(BLAST)

001: MASCSIGTPN IKALNLHFGG KKVGLSQQFG TRSWISKQSL QYTSLVMSRQ KVRFSPTEIQ FVTRSEGSEE VKSSGLTSEL IPNLIEVEFL LTKLCDTSSI
101: GELDLKLAGF HLHVVRDLTE KTKTLPPPIP ASESIINVTE TPKTNGSVST TSLAVSKPVD PIPSSGSIQR FLNKAADEGL VIIQSPKVGF FRRSRTIKGR
201: RAPPSCKEKQ NVEEGQVICY IEQLGGELPI ESDVSGEVIK ILQKDGDPVG YGDALVAILP SFPGIKKLQ

Best Arabidopsis Sequence Match ( AT3G15690.2 )
(BLAST)

001: MASCSLGVPK IKISAVDLSR VRSGSLLIPY NQRSLLRQRP VKYLSLKTTF GSVKAVQVST VPTAETSATI EVKDSKEIKS SRLNAQLVPK PSEVEALVTE
101: ICDSSSIAEF ELKLGGFRLY VARNIADNSS LQPPPTPAVT ASNATTESPE SNGSASSTSL AISKPASSAA DQGLMILQSP KVGFFRRSKT IKGKRLPSSC
201: KEKDQVKEGQ ILCYIEQLGG QFPIESDVTG EVVKILREDG EPVGYNDALI SILPSFPGIK KLQ

Arabidopsis Description

Putative acetyl-CoA carboxylase biotin-containing subunit [Source:UniProtKB/TrEMBL;Acc:Q8GRT9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.