CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97672	Soybean	endoplasmic reticulum	88.55	90.38
VIT_13s0067g02060.t01	Wine grape	plastid	56.23	57.99
Solyc06g050590.2.1	Tomato	plastid	52.53	53.79
PGSC0003DMT400061547	Potato	plastid	51.85	53.29
AT3G56130.1	Thale cress	plastid	48.82	51.6
GSMUA_Achr1P26670_001	Banana	mitochondrion, plastid	47.14	50.72
CDX72171	Canola	plastid	42.09	48.45
Bra007218.1-P	Field mustard	plastid	43.43	47.78
CDY27243	Canola	plastid	43.43	47.78
GSMUA_Achr8P33740_001	Banana	plastid	43.1	46.04
GSMUA_Achr9P16490_001	Banana	plastid	43.77	45.61
KRH09764	Soybean	plastid	27.61	30.48
KRH23555	Soybean	plasma membrane	29.63	29.53

Protein Annotations

EMBL:ACUP02007129	EnsemblPlants:KRH31200	EnsemblPlantsGene:GLYMA_11G233700	EntrezGene:100809495	Gene3D:2.40.50.100	InterPro:Biotin_lipoyl
InterPro:IPR000089	InterPro:Single_hybrid_motif	PANTHER:PTHR43416	PANTHER:PTHR43416:SF4	PFAM:PF00364	ProteinID:KRH31200
ProteinID:KRH31200.1	ProteinID:KRH31201.1	SEG:seg	SUPFAM:SSF51230	UniParc:UPI00023CBB75	UniProt:I1LMV4
MapMan:5.1.3.3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:32903831..32909615

Molecular Weight (calculated)

32066.5 Da

IEP (calculated)

9.321

GRAVY (calculated)

-0.385

Length

297 amino acids

Sequence
(BLAST)

001: MFLQIYNQRM LCNHPRAYPI GTMSHVRASL EKQAVVPIHN AGWNSKSRLF IQHLAYGQKH INSHTKGKNT LISCGKTAEA INASKSDASS DNTPQGSLEK
101: KPLQTATFPN GFEALVLEVC DETEIAELKV KVGDFEMHIK RNIGATKVPL SNISPTTPPP IPSKPMDESA PGSLPPSPPK SSPEKNNPFA NVSKEKSPRL
201: AALEASGTNT YVLVSSPTVG LFRRGRTVKG KKQPPICKEG DVIKEGQVIG YLDQFGTGLP IKSDVAGEVL KLLVEDGEPV GYGDPLIAVL PSFHDIK

Best Arabidopsis Sequence Match ( AT3G56130.2 )
(BLAST)

001: MTYGCTFLYM LLDEMLQALV HEMCDETEVA VLQLKVGDFE MNLKRKIGAA TNPIPVADIS PTVAPPIPSE PMNKSASSAP SPSQAKPSSE KVSPFKNTSY
101: GKPAKLAALE ASGSTNYVLV TSPAVGKFQR SRTVKGKKQS PSCKEGDAIK EGQVIGYLHQ LGTELPVTSD VAGEVLKLLS DDGDSVGYGD PLVAVLPSFH
201: DINIQ

Arabidopsis Description

AT3g56130/F18O21_90 [Source:UniProtKB/TrEMBL;Acc:Q93W03]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.