Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g050590.2.1 | Tomato | plastid | 95.16 | 94.83 |
| VIT_13s0067g02060.t01 | Wine grape | plastid | 58.13 | 58.33 |
| KRG97672 | Soybean | endoplasmic reticulum | 55.71 | 55.33 |
| KRH31200 | Soybean | mitochondrion | 53.29 | 51.85 |
| GSMUA_Achr1P26670_001 | Banana | mitochondrion, plastid | 46.37 | 48.55 |
| Bra007218.1-P | Field mustard | plastid | 44.29 | 47.41 |
| CDY27243 | Canola | plastid | 44.29 | 47.41 |
| AT3G56130.1 | Thale cress | plastid | 43.6 | 44.84 |
| GSMUA_Achr8P33740_001 | Banana | plastid | 42.91 | 44.6 |
| CDX72171 | Canola | plastid | 39.79 | 44.57 |
| GSMUA_Achr9P16490_001 | Banana | plastid | 42.91 | 43.51 |
| PGSC0003DMT400073476 | Potato | plastid | 31.49 | 33.21 |
Protein Annotations
| EntrezGene:102606445 | Gene3D:2.40.50.100 | MapMan:5.1.3.3 | InterPro:Biotin_lipoyl | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0045717 | InterPro:IPR000089 | UniProt:M1C7P0 |
| PFAM:PF00364 | EnsemblPlantsGene:PGSC0003DMG400023955 | PGSC:PGSC0003DMG400023955 | EnsemblPlants:PGSC0003DMT400061547 | PANTHER:PTHR43416 | PANTHER:PTHR43416:SF4 |
| SUPFAM:SSF51230 | InterPro:Single_hybrid_motif | UniParc:UPI000295F7D1 | RefSeq:XP_006353414.1 | SEG:seg | : |
Description
Biotin carboxyl carrier protein of acetyl-CoA carboxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400023955]
Coordinates
chr6:-:30464415..30470256
Molecular Weight (calculated)
29988.9 Da
IEP (calculated)
9.505
GRAVY (calculated)
-0.111
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MESAAVLRSF HHSVGTTSHV RSVIEMPGVI PTNSIAFSKP TKLSLKGSSN GARLMSSPNK HGRLTLSCAK TSETTVTAKS GDSNQKVPTE SSPLPTATFP
101: KGFEALIIEV CDDTEVAELK LKVGDFELHL KRNIEAPVVP APVVSAPPPP PPSASKTSIS STAAAPAASP GKSSSGKISP FTNVAAEKSA KLAALESTGA
201: SGYVLVSCPT VGSFRRARTL KGKKQPPACK EGDIIKEGQI IGFLDQFGTE LPVRSDAAGE VLKILFNDGE AVGYGDPLIA VLPSFRGIN
101: KGFEALIIEV CDDTEVAELK LKVGDFELHL KRNIEAPVVP APVVSAPPPP PPSASKTSIS STAAAPAASP GKSSSGKISP FTNVAAEKSA KLAALESTGA
201: SGYVLVSCPT VGSFRRARTL KGKKQPPACK EGDIIKEGQI IGFLDQFGTE LPVRSDAAGE VLKILFNDGE AVGYGDPLIA VLPSFRGIN
001: MASSAALGSL HQTLGSAINS QSEVHSLSGN WSASGNSCVP RWRLSNRNSN YRLVLRAKAA KSSTTTISDG SSDASVSDGK KTVRRITFPK EVEALVHEMC
101: DETEVAVLQL KVGDFEMNLK RKIGAATNPI PVADISPTVA PPIPSEPMNK SASSAPSPSQ AKPSSEKVSP FKNTSYGKPA KLAALEASGS TNYVLVTSPA
201: VGKFQRSRTV KGKKQSPSCK EGDAIKEGQV IGYLHQLGTE LPVTSDVAGE VLKLLSDDGD SVGYGDPLVA VLPSFHDINI Q
101: DETEVAVLQL KVGDFEMNLK RKIGAATNPI PVADISPTVA PPIPSEPMNK SASSAPSPSQ AKPSSEKVSP FKNTSYGKPA KLAALEASGS TNYVLVTSPA
201: VGKFQRSRTV KGKKQSPSCK EGDAIKEGQV IGYLHQLGTE LPVTSDVAGE VLKLLSDDGD SVGYGDPLVA VLPSFHDINI Q
Arabidopsis Description
AT3g56130/F18O21_90 [Source:UniProtKB/TrEMBL;Acc:Q93W03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.