Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007218.1-P | Field mustard | plastid | 70.46 | 73.33 |
| CDY27243 | Canola | plastid | 70.11 | 72.96 |
| CDX72171 | Canola | plastid | 64.77 | 70.54 |
| KRG97672 | Soybean | endoplasmic reticulum | 52.31 | 50.52 |
| KRH31200 | Soybean | mitochondrion | 51.6 | 48.82 |
| GSMUA_Achr1P26670_001 | Banana | mitochondrion, plastid | 45.55 | 46.38 |
| VIT_13s0067g02060.t01 | Wine grape | plastid | 46.26 | 45.14 |
| PGSC0003DMT400061547 | Potato | plastid | 44.84 | 43.6 |
| Solyc06g050590.2.1 | Tomato | plastid | 43.77 | 42.41 |
| GSMUA_Achr8P33740_001 | Banana | plastid | 41.28 | 41.73 |
| GSMUA_Achr9P16490_001 | Banana | plastid | 41.99 | 41.4 |
| AT3G15690.2 | Thale cress | plastid | 29.18 | 31.18 |
| AT1G52670.1 | Thale cress | plastid | 27.05 | 27.74 |
Protein Annotations
| Gene3D:2.40.50.100 | MapMan:5.1.3.3 | EntrezGene:824779 | UniProt:A0A178VL63 | ProteinID:AEE79481.1 | EMBL:AF378871 |
| ArrayExpress:AT3G56130 | EnsemblPlantsGene:AT3G56130 | RefSeq:AT3G56130 | TAIR:AT3G56130 | RefSeq:AT3G56130-TAIR-G | EnsemblPlants:AT3G56130.1 |
| TAIR:AT3G56130.1 | EMBL:AY050468 | InterPro:Biotin_lipoyl | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0045717 |
| InterPro:Galactose-bd-like_sf | InterPro:IPR000089 | InterPro:IPR008979 | RefSeq:NP_567035.1 | ProteinID:OAP05572.1 | PFAM:PF00364 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR43416 | PANTHER:PTHR43416:SF4 | UniProt:Q93W03 | SUPFAM:SSF49785 | SUPFAM:SSF51230 | InterPro:Single_hybrid_motif |
| UniParc:UPI00000A0B25 | SEG:seg | : | : | : | : |
Description
AT3g56130/F18O21_90 [Source:UniProtKB/TrEMBL;Acc:Q93W03]
Coordinates
chr3:+:20826576..20829270
Molecular Weight (calculated)
29577.9 Da
IEP (calculated)
9.096
GRAVY (calculated)
-0.324
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSAALGSL HQTLGSAINS QSEVHSLSGN WSASGNSCVP RWRLSNRNSN YRLVLRAKAA KSSTTTISDG SSDASVSDGK KTVRRITFPK EVEALVHEMC
101: DETEVAVLQL KVGDFEMNLK RKIGAATNPI PVADISPTVA PPIPSEPMNK SASSAPSPSQ AKPSSEKVSP FKNTSYGKPA KLAALEASGS TNYVLVTSPA
201: VGKFQRSRTV KGKKQSPSCK EGDAIKEGQV IGYLHQLGTE LPVTSDVAGE VLKLLSDDGD SVGYGDPLVA VLPSFHDINI Q
101: DETEVAVLQL KVGDFEMNLK RKIGAATNPI PVADISPTVA PPIPSEPMNK SASSAPSPSQ AKPSSEKVSP FKNTSYGKPA KLAALEASGS TNYVLVTSPA
201: VGKFQRSRTV KGKKQSPSCK EGDAIKEGQV IGYLHQLGTE LPVTSDVAGE VLKLLSDDGD SVGYGDPLVA VLPSFHDINI Q
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.