Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68515
CDX75003
CDX79705
CDX83068
CDX85505
CDY33207
CDY38110
CDY46745
CDY55578
CDY64675
CDY69935

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G49160.1 CDX75003 AT2G36930.1 21798944
AT3G49160.1 CDX79705 AT2G36930.1 21798944
AT3G49160.1 CDY33207 AT2G36930.1 21798944
AT3G49160.1 CDY46745 AT2G36930.1 21798944
AT3G49160.1 CDX85505 AT3G15420.1 21798944
AT3G49160.1 CDY38110 AT3G15420.1 21798944
AT3G49160.1 CDY55578 AT3G15420.1 21798944
AT3G49160.1 CDY64675 AT3G15420.1 21798944
AT3G49160.1 CDX68515 AT3G49160.1 21798944
AT3G49160.1 CDX83068 AT3G49160.1 21798944
AT3G49160.1 CDY69935 AT3G49160.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68515 Canola mitochondrion 89.42 62.19
Bra029936.1-P Field mustard endoplasmic reticulum, vacuole 97.72 61.01
AT3G49160.1 Thale cress cytosol 87.34 59.3
VIT_16s0050g02660.t01 Wine grape plastid 67.22 42.74
CDX83068 Canola plastid 60.17 39.94
PGSC0003DMT400050451 Potato plastid 61.0 38.89
Solyc06g051930.2.1 Tomato plastid 60.58 38.62
GSMUA_Achr7P10730_001 Banana plastid 47.72 36.74
CDY42678 Canola cytosol 4.77 25.84
CDY60038 Canola cytosol 11.62 25.34
CDX81194 Canola cytosol 11.2 25.12
CDY46578 Canola cytosol 20.75 23.75
CDY32790 Canola cytosol 20.75 23.75
CDY42677 Canola cytosol 5.19 22.73
CDY11933 Canola cytosol, mitochondrion, plastid 20.33 22.58
CDY27175 Canola cytosol, mitochondrion 20.33 21.68
CDY50878 Canola cytosol 21.58 21.22
CDY42900 Canola cytosol 20.54 20.97
CDY66490 Canola cytosol 21.37 20.93
CDY66977 Canola cytosol 21.37 20.93
CDX92057 Canola cytosol 20.33 20.68
CDX74201 Canola cytosol 20.33 20.68
CDX84432 Canola cytosol 20.95 20.49
CDY41529 Canola cytosol 20.95 20.49
CDY39852 Canola cytosol 20.54 20.08
CDY36795 Canola endoplasmic reticulum 16.39 20.05
CDX78344 Canola cytosol 20.33 19.88
CDX81114 Canola cytosol 20.12 19.68
CDY21551 Canola cytosol 20.54 19.41
CDX69938 Canola cytosol 20.54 19.41
CDY45309 Canola plastid 12.45 19.29
CDX72091 Canola mitochondrion, plastid 17.43 18.22
CDY04408 Canola cytosol 3.32 17.2
CDY32285 Canola plastid 19.29 16.29
CDY48872 Canola plastid 19.29 16.29
CDY47408 Canola cytosol 3.11 16.13
CDY01123 Canola cytosol 1.45 15.91
CDX81195 Canola cytosol 7.68 15.88
CDY60039 Canola cytosol 7.68 15.88
CDY60911 Canola plastid 19.09 15.86
CDY66652 Canola plastid 19.09 15.86
CDY19645 Canola plastid 19.09 15.83
CDX78139 Canola cytosol, plastid 17.01 15.56
CDX67554 Canola cytosol, plastid 17.01 15.56
CDY13321 Canola cytosol, plastid 16.8 15.37
CDX73585 Canola cytosol, plastid 16.8 15.37
CDX76243 Canola cytosol, plastid 16.8 15.37
CDY58286 Canola cytosol, plastid 16.6 15.18
CDY26450 Canola cytosol 2.9 15.05
CDX92969 Canola plastid 17.84 14.96
CDY40829 Canola plastid 17.84 14.9
CDY35484 Canola plastid 17.84 14.9
CDX94878 Canola plastid 17.63 14.63
CDY00607 Canola cytosol 11.0 13.73
CDY42679 Canola mitochondrion 0.41 1.74
Protein Annotations
KEGG:00010+2.7.1.40KEGG:00230+2.7.1.40KEGG:00620+2.7.1.40Gene3D:3.20.20.60MapMan:35.1GO:A0A078JU04
UniProt:A0A078JU04EnsemblPlants:CDY69935ProteinID:CDY69935ProteinID:CDY69935.1GO:GO:0000287GO:GO:0003674
GO:GO:0003824GO:GO:0004743GO:GO:0005488GO:GO:0005975GO:GO:0006091GO:GO:0006096
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987
GO:GO:0016740GO:GO:0030955EnsemblPlantsGene:GSBRNA2T00093659001PFAM:PF00224PANTHER:PTHR11817PANTHER:PTHR11817:SF28
MetaCyc:PWY-1042MetaCyc:PWY-2221MetaCyc:PWY-5484MetaCyc:PWY-5723MetaCyc:PWY-6142MetaCyc:PWY-6886
MetaCyc:PWY-6901MetaCyc:PWY-7003MetaCyc:PWY-7218MetaCyc:PWY-7383InterPro:Pyr_KnaseInterPro:Pyrv/PenolPyrv_Kinase-like_dom
InterPro:Pyrv_Knase-like_insert_dom_sfInterPro:Pyrv_Knase_brlSUPFAM:SSF50800SUPFAM:SSF51621UniPathway:UPA00109UniParc:UPI0004EF383F
Description
BnaAnng32070DBnaAnng32070D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JU04]
Coordinates
chrLK040719:-:2072..3609
Molecular Weight (calculated)
52597.3 Da
IEP (calculated)
8.602
GRAVY (calculated)
-0.068
Length
482 amino acids
Sequence
(BLAST)
001: LREGKRTHIM VTVGKEATES ETFITDILKA GASVIRINCA HGDPTIWGEI IKRVRRTSQM LEMPCRVLMD LAGPKLRTGT LKPGPCVMKV SPKKDAYGNV
101: ASPAIVWLSV TGTEPPPHLS PDATIFVQDQ EFLAGLQIGD SVRLYDARGK KKKLRISKEF DVFSSTGFVA ECFDTAYVES GTELCVKGNK GRRLLGEVVD
201: VPPKESFVRL RVGDLLVITR EGSFDEPSVT VPGAHRLTCP SGYLFDSVKP GETIGFDDGK IWGTIKGASP AEVIVSITHA GPKGTKLGSE KSINIPQSDI
301: RFKGLTSKDI KDLQYVASHA DMVGISFIRD VQDITVLRQE LKKRKLNDQL GVVLKIETEC GFENLPLILL EAMKCLNPLG VMIARGDLAV ECGWERLANI
401: QEEILAICKV ARVPVILATQ VLESLVKSGV PSRAEITDAA NGRRASCVML NKGKHITEAV SMLDTILHTK LTYKKLDSGN LH
Best Arabidopsis Sequence Match ( AT3G49160.1 )
(BLAST)
001: MVGLDSSHLL RDKILCFSSR SHINNQHKKT SYALSLNHMK LPIQRTLAFA LARGKGEAES FSRLEATFGD NTSTECTWSF DFPDSKDAMS HLKSEADLSG
101: SNGANNVASV IEKLNALRSH LLAAEKWNAS QLHLCDSKYL ECATNLVHYM ALRSLDIEQL NSHLASLGLS SLDNNNLDVL AHLNASINLL MNDQNAVTES
201: WTNVYPKGKS TKKNDKGRVL SYKESLLGKL REGRSTHIMV TIGEEATLSE TFITDILKAG TSVIRINCAH GDPSIWGEII KRVRRTSQML EMPCRVHMDL
301: AGPKLRTGTL KPGPCVMKIS PKKDAYGNVV SPALVWLCLT GTEPPAHVSP DATISVQGQD FLAGLQIGDS IRLCDARGRK RRLKISKEFH VFNSTGFVAE
401: CFDTAYIESG TELSVKGKKG RRLVGRVVDV PPKESFVRLK VGDLLVITRE GSLDEPSVTV PGAHRLTCPS GYLFDSVKPG ETIGFDDGKI WGVIKGTSPS
501: EVIVSITHAR PKGTKLGSEK SINIPQSDIH FKGLTSKDIK DLDYVASHAD MVGISFIRDV HDITVLRQEL KKRKLDDLGI VLKIETKSGF KNLSLILLEA
601: MKCSNPLGIM IARGDLAVEC GWERLANMQE EIIAICKAAR VPVIMATQVL ESLVKSGVPT RAEITDAANA KRASCVMLNK GKNIVEAVSM LDTILHTKLI
701: YKKSDSENLH
Arabidopsis Description
PKP4Plastidial pyruvate kinase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.