Factsheet for PGSC0003DMT400050451

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400003969
PGSC0003DMT400009848
PGSC0003DMT400032421
PGSC0003DMT400050451

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49160.1	PGSC0003DMT400009848	AT2G36930.1	21798944
AT3G49160.1	PGSC0003DMT400003969	AT3G15420.1	21798944
AT3G49160.1	PGSC0003DMT400032421	AT3G15420.1	21798944
AT3G49160.1	PGSC0003DMT400050451	AT3G49160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g051930.2.1	Tomato	plastid	95.63	95.63
CDY69935	Canola	cytosol	38.89	61.0
VIT_16s0050g02660.t01	Wine grape	plastid	57.8	57.65
AT3G49160.1	Thale cress	cytosol	47.49	50.56
CDX68515	Canola	mitochondrion	44.84	48.92
GSMUA_Achr7P10730_001	Banana	plastid	39.68	47.92
Bra029936.1-P	Field mustard	endoplasmic reticulum, vacuole	48.28	47.28
CDX83068	Canola	plastid	31.35	32.64
PGSC0003DMT400065094	Potato	cytosol	14.02	20.78
PGSC0003DMT400028308	Potato	plastid	12.96	19.52
PGSC0003DMT400066112	Potato	plastid	13.89	18.26
PGSC0003DMT400016844	Potato	plastid	13.76	17.99
PGSC0003DMT400006945	Potato	mitochondrion	10.71	16.23
PGSC0003DMT400062238	Potato	plastid	12.3	16.03
PGSC0003DMT400072411	Potato	cytosol	10.45	15.83
PGSC0003DMT400070332	Potato	endoplasmic reticulum, extracellular, vacuole	3.84	15.51
PGSC0003DMT400070265	Potato	cytosol	10.71	15.37

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	EntrezGene:102601765	Gene3D:3.20.20.60	MapMan:35.1
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030955	UniProt:M1BQB1	PFAM:PF00224
EnsemblPlantsGene:PGSC0003DMG400019605	PGSC:PGSC0003DMG400019605	EnsemblPlants:PGSC0003DMT400050451	PANTHER:PTHR11817	PANTHER:PTHR11817:SF28	InterPro:Pyr_Knase
InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_brl	SUPFAM:SSF50800	SUPFAM:SSF51621	UniParc:UPI00029539C6
RefSeq:XP_006360172.1	SEG:seg	:	:	:	:

Description

Pyruvate kinase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400019605]

Coordinates

chr6:-:38207121..38214377

Molecular Weight (calculated)

83397.4 Da

IEP (calculated)

8.813

GRAVY (calculated)

-0.092

Length

756 amino acids

Sequence
(BLAST)

001: MLGGVASVAI FTNQSALSNN GFQIASFLLV RSSNLSRKYS IPQPFFKIPG FREHIVQFIA SNNGNLARKN IVFAIPNEKD DAEKEGSDYY IDYPVIVGQK
101: EDGSSCAPEM GTTFSLLPCG EGILRSYEIN GKEDGLLAKL MAVHLHVLAM EQWNASKLKM SHKNYLVSAT NLIHYLALKS LNIEQLKEEL SSICLLNLDT
201: INQHVLASLS AGIRLLDNLK YDSSSHTISY SEGISSTKGL DKQMKGEFSI NTLRRRASHT ADLLLGRLPE KRNTHIMVTV GEEAIESETL MKDLLNAGTT
301: IVRINCAHGS PEIWSEIIRR VKRSSQILEK PCRILMDLAG PKLRTGKLQA GPCVLKISPK KNAYGKVIYP ALVWLSSPGA ASPPAHVSPD AILHVDGEEL
401: LSKLEVDDVV TLFDARGKQR TLKIISRYPI FSGVGYMAEC SKAAYVKSGA KLFIKDKRRK LSAGHVVNIP PLKQFIKLRV DDLLSISRDG QNEENNLTSS
501: TGAHRIACSS EYVFDSVKPG EPIAFDDGKI WGIIKATSTL EILVSITHAG PRGSKLGSEK SINIPRSNIR YEGLTSKDLI DLDFVANHAD MVGVSFVRDV
601: RDILLLRQEL EKRKRRDLGI SLKIETKEGF EKLPLLLLEA MKMPNPLGIM IARGDLAVEC GWENMAYIQK EIISVCTAAH VPVIWATQVL ESLVRSGVPT
701: RAELTDVAEG MRTSCIMLNK GKCIVEAVSF LHRILSNHST KLDAEFKPLA LSSHDF

Best Arabidopsis Sequence Match ( AT3G49160.1 )
(BLAST)

001: MVGLDSSHLL RDKILCFSSR SHINNQHKKT SYALSLNHMK LPIQRTLAFA LARGKGEAES FSRLEATFGD NTSTECTWSF DFPDSKDAMS HLKSEADLSG
101: SNGANNVASV IEKLNALRSH LLAAEKWNAS QLHLCDSKYL ECATNLVHYM ALRSLDIEQL NSHLASLGLS SLDNNNLDVL AHLNASINLL MNDQNAVTES
201: WTNVYPKGKS TKKNDKGRVL SYKESLLGKL REGRSTHIMV TIGEEATLSE TFITDILKAG TSVIRINCAH GDPSIWGEII KRVRRTSQML EMPCRVHMDL
301: AGPKLRTGTL KPGPCVMKIS PKKDAYGNVV SPALVWLCLT GTEPPAHVSP DATISVQGQD FLAGLQIGDS IRLCDARGRK RRLKISKEFH VFNSTGFVAE
401: CFDTAYIESG TELSVKGKKG RRLVGRVVDV PPKESFVRLK VGDLLVITRE GSLDEPSVTV PGAHRLTCPS GYLFDSVKPG ETIGFDDGKI WGVIKGTSPS
501: EVIVSITHAR PKGTKLGSEK SINIPQSDIH FKGLTSKDIK DLDYVASHAD MVGISFIRDV HDITVLRQEL KKRKLDDLGI VLKIETKSGF KNLSLILLEA
601: MKCSNPLGIM IARGDLAVEC GWERLANMQE EIIAICKAAR VPVIMATQVL ESLVKSGVPT RAEITDAANA KRASCVMLNK GKNIVEAVSM LDTILHTKLI
701: YKKSDSENLH

Arabidopsis Description

PKP4Plastidial pyruvate kinase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.