Factsheet for PGSC0003DMT400028308

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400006945
PGSC0003DMT400049056
PGSC0003DMT400072411

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56350.1	PGSC0003DMT400006945	AT2G36580.1	21798944
AT5G56350.1	PGSC0003DMT400072411	AT2G36580.1	21798944
AT5G56350.1	PGSC0003DMT400049056	AT4G33030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g049650.2.1	Tomato	cytosol, mitochondrion, plastid	98.61	98.61
VIT_06s0004g00130.t01	Wine grape	cytosol	89.24	88.54
KRH50504	Soybean	mitochondrion	88.05	88.22
KRG89466	Soybean	endoplasmic reticulum, nucleus	88.05	88.05
AT5G56350.1	Thale cress	cytosol, mitochondrion, plastid	86.65	87.35
CDY11933	Canola	cytosol, mitochondrion, plastid	75.3	87.1
Bra028934.1-P	Field mustard	cytosol, mitochondrion, plastid	80.88	86.38
Bra009818.1-P	Field mustard	mitochondrion	39.24	86.03
CDY32790	Canola	cytosol	72.11	85.99
CDY46578	Canola	cytosol	72.11	85.99
Bra002822.1-P	Field mustard	cytosol	85.06	85.74
AT4G26390.1	Thale cress	mitochondrion	83.27	84.1
CDY36795	Canola	endoplasmic reticulum	64.74	82.49
EES02767	Sorghum	cytosol	83.27	82.12
Os01t0276700-02	Rice	cytosol	82.87	81.57
Zm00001d040446_P001	Maize	extracellular, plasma membrane	81.67	80.55
TraesCS3D01G192800.1	Wheat	cytosol	81.08	79.34
TraesCS3A01G189300.1	Wheat	cytosol	81.08	79.34
HORVU3Hr1G039230.1	Barley	cytosol, plastid	80.68	78.95
CDY45309	Canola	plastid	48.21	77.81
TraesCS4D01G176600.1	Wheat	cytosol	78.88	77.8
TraesCS4B01G174700.1	Wheat	cytosol	78.88	77.8
TraesCS3B01G218500.1	Wheat	mitochondrion	80.68	77.44
TraesCS4A01G129900.1	Wheat	cytosol	78.49	77.41
PGSC0003DMT400065094	Potato	cytosol	77.09	75.88
EER92334	Sorghum	cytosol	78.09	75.68
HORVU3Hr1G039200.3	Barley	cytosol	67.53	75.0
Os03t0325000-00	Rice	cytosol	62.15	72.22
PGSC0003DMT400006945	Potato	mitochondrion	43.03	43.29
PGSC0003DMT400072411	Potato	cytosol	40.84	41.08
PGSC0003DMT400070265	Potato	cytosol	40.84	38.9
PGSC0003DMT400016844	Potato	plastid	34.86	30.28
PGSC0003DMT400062238	Potato	plastid	34.66	30.0
PGSC0003DMT400066112	Potato	plastid	29.88	26.09
PGSC0003DMT400070332	Potato	endoplasmic reticulum, extracellular, vacuole	7.97	21.39
PGSC0003DMT400050451	Potato	plastid	19.52	12.96

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	EntrezGene:102596468	MapMan:2.1.1.8	Gene3D:2.40.33.10
Gene3D:3.20.20.60	Gene3D:3.40.1380.20	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743
GO:GO:0005488	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806	InterPro:IPR036918	UniProt:M1AQZ1	PFAM:PF00224
PFAM:PF02887	EnsemblPlantsGene:PGSC0003DMG400010913	PGSC:PGSC0003DMG400010913	EnsemblPlants:PGSC0003DMT400028308	PRINTS:PR01050	ScanProsite:PS00110
PANTHER:PTHR11817	PANTHER:PTHR11817:SF5	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_AS
InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621
SUPFAM:SSF52935	TIGRFAMs:TIGR01064	UniParc:UPI000295AC33	RefSeq:XP_006356872.1	SEG:seg	:

Description

Pyruvate kinase, cytosolic isozyme [Source:PGSC_GENE;Acc:PGSC0003DMG400010913]

Coordinates

chr1:+:19663748..19667579

Molecular Weight (calculated)

54360.1 Da

IEP (calculated)

7.438

GRAVY (calculated)

-0.037

Length

502 amino acids

Sequence
(BLAST)

001: MAIENSNNVK RPKTKIVCTL GPASRSVPMV EKLLRAGMNV ARFNFSHGSH DYHQETIDNL RQAMENTGIL CAVMLDTKGP EIRTGFLKDG KPVQLKQGQE
101: ITVSTDYSIK GDESTICMSY KKLAEDVKPQ SVILCADGTI TFTVLSCDKE KGLVRCRCEN TAVLGERKNV NLPGVIVDLP TLTDKDKDDI LNWGVPNHID
201: MIALSFVRKG SDLVGVRKLL GEHAKNILLM SKVENQEGVA NFDDILANSD AFMVARGDLG MEIPIEKIFL AQKVMIYKCN IQGKPVVTAT QMLESMIKSP
301: RPTRAEATDV ANAVLDGTDC VMLSGETAAG AYPDLAVGTM ARICIEAEST IDYPDVFKRI MANAPVPMSP LESLASSAVR TANSAKAALI LVLTRGGSTA
401: KLVAKYRPGM PILSVVVPEI KTDSFDWTCS DESPARHSLI FRGLVPVLHA GSARASHEES TEEALYFALQ HAKTKGLCKE GDSVVALHRV GTASVIKIVT
501: VK

Best Arabidopsis Sequence Match ( AT5G56350.1 )
(BLAST)

001: MAMIEQRPKT KIVCTLGPAS RSVPMVEKLL RAGMNVARFN FSHGSHEYHQ ETLDNLHQAM LNTGILCAVM LDTKGPEIRT GFLKDGKPIQ LKQGQEITIS
101: TDYDLKGDEN TICMSYKKLA VDVNPGMVIL CADGTISLLV LSCDKENGTV RCRCENSAML GERKNVNLPG VVVDLPTLTE KDKEDIMQWG VPNQIDMIAL
201: SFVRKGSDLV QVRKLLGKHA KNILLMSKVE NQEGVANFDD ILVNSDAFMI ARGDLGMEIP IEKIFLAQKV MIYKCNIQGK PVVTATQMLE SMIKSPRPTR
301: AEATDVANAV LDGTDCVMLS GETAAGAYPE LAVRTMAKIC VEAESTLDYG DVFKRIMLYS PVPMSPLESL ASSAVRTANS ARATLIMVLT RGGSTARLVA
401: KYRPGMPILS VVVPEIKTDF FDWSCSDESP ARHSLIFRGL IPVLYAGSAR ASHDESTEEA IEFATQYGKE KELCKTGDSV VALLRVGNAS VIKILTVK

Arabidopsis Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:Q9FM97]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.