Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX69568 | Canola | plastid | 98.18 | 97.12 |
AT5G14660.1 | Thale cress | plastid | 87.27 | 87.91 |
TraesCS3A01G225700.1 | Wheat | cytosol | 37.09 | 63.35 |
VIT_14s0066g01070.t01 | Wine grape | plastid | 59.64 | 59.64 |
PGSC0003DMT400001396 | Potato | plastid | 59.64 | 59.21 |
Solyc02g086680.2.1 | Tomato | plastid | 58.55 | 57.71 |
KRG94095 | Soybean | mitochondrion, plastid | 56.0 | 57.68 |
GSMUA_Achr1P04750_001 | Banana | plastid | 58.18 | 57.35 |
EES03332 | Sorghum | mitochondrion | 53.45 | 55.68 |
Zm00001d011445_P006 | Maize | mitochondrion | 53.09 | 55.3 |
Os01t0637600-01 | Rice | mitochondrion | 53.45 | 54.65 |
TraesCS3D01G223800.1 | Wheat | mitochondrion | 51.27 | 52.22 |
TraesCS3B01G258700.1 | Wheat | plastid | 50.55 | 51.48 |
KRG94880 | Soybean | plastid | 35.27 | 48.74 |
Os01t0636600-01 | Rice | plastid | 46.91 | 47.96 |
CDY39642 | Canola | mitochondrion | 23.64 | 26.97 |
CDX81711 | Canola | mitochondrion | 24.36 | 26.17 |
CDY55984 | Canola | mitochondrion | 24.0 | 25.68 |
CDY36556 | Canola | mitochondrion | 22.55 | 23.85 |
Protein Annotations
MapMan:17.7.6.1 | Gene3D:3.90.45.10 | GO:A0A078FA43 | UniProt:A0A078FA43 | EnsemblPlants:CDY09874 | ProteinID:CDY09874 |
ProteinID:CDY09874.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
GO:GO:0042586 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00031625001 | InterPro:IPR036821 | HAMAP:MF_00163 | PFAM:PF01327 |
PRINTS:PR01576 | PANTHER:PTHR10458 | PANTHER:PTHR10458:SF2 | InterPro:Peptide_deformylase | InterPro:Peptide_deformylase_sf | SUPFAM:SSF56420 |
TIGRFAMs:TIGR00079 | UniParc:UPI0004EDF4BB | SEG:seg | : | : | : |
Description
BnaC09g42870DPeptide deformylase [Source:UniProtKB/TrEMBL;Acc:A0A078FA43]
Coordinates
chrLK031999:-:747804..750002
Molecular Weight (calculated)
30551.8 Da
IEP (calculated)
8.595
GRAVY (calculated)
-0.287
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVCNCFLQA PPLSRFLSPV FSRRATNLFP GCGQLKSTVM FSSSSAANRT GPLTSPVRAE VKRVSRKESE IASASDLQFE TPLKIVEYPD PILRAKNKRI
101: GVFDENLKNL ADAMFDVMYK TDGIGLSAPQ VGLNVQLMVF NPAGESGEGE EIVLVNPKIN KYSDKLVPFN EGCLSFPGIY ADVVRPQSVK IDARDITGAR
201: FSISLSRLPA RIFQHEYDHL EGVLFFDRMT DDVLDTIREE LEALEKKYEE KTGLPSPEKV QARQKRKAGV GFGKR
101: GVFDENLKNL ADAMFDVMYK TDGIGLSAPQ VGLNVQLMVF NPAGESGEGE EIVLVNPKIN KYSDKLVPFN EGCLSFPGIY ADVVRPQSVK IDARDITGAR
201: FSISLSRLPA RIFQHEYDHL EGVLFFDRMT DDVLDTIREE LEALEKKYEE KTGLPSPEKV QARQKRKAGV GFGKR
001: MAVCNCFLQA PPLSRILLPV LSRRATTLSA GYGRLKSTVT FCSTVNRTSP LTSSVRAEVK RVSRKDDKVA SATDVQFETP LKIVEYPDPI LRAKNKRIDI
101: FDENLKNLVD AMFDVMYKTD GIGLSAPQVG LNVQLMVFNP AGEPGEGKEI VLVNPKIKKY SDKLVPFDEG CLSFPGIYAE VVRPQSVKID ARDITGERFS
201: ISLSRLPARI FQHEYDHLEG VLFFDRMTDQ VLDSIREELE ALEKKYEEKT GLPSPERVEA RQKRKAGVGF GKR
101: FDENLKNLVD AMFDVMYKTD GIGLSAPQVG LNVQLMVFNP AGEPGEGKEI VLVNPKIKKY SDKLVPFDEG CLSFPGIYAE VVRPQSVKID ARDITGERFS
201: ISLSRLPARI FQHEYDHLEG VLFFDRMTDQ VLDSIREELE ALEKKYEEKT GLPSPERVEA RQKRKAGVGF GKR
Arabidopsis Description
PDF1BPeptide deformylase 1B, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FUZ2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.