Factsheet for Zm00001d035721_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21031	Sorghum	plastid	73.48	81.17
TraesCS1D01G020100.1	Wheat	mitochondrion	58.33	66.38
TraesCS1B01G024600.1	Wheat	mitochondrion, plastid	58.33	66.09
Os05t0106500-01	Rice	mitochondrion	53.41	61.3
HORVU1Hr1G002830.2	Barley	plastid	55.68	53.07
TraesCS1A01G020600.1	Wheat	plastid	57.2	46.46
KRH38185	Soybean	cytosol, nucleus	21.21	39.72
GSMUA_Achr8P17360_001	Banana	endoplasmic reticulum, extracellular	28.79	36.19
KRH53847	Soybean	nucleus	27.65	35.96
Zm00001d002891_P001	Maize	cytosol	19.32	31.68
KRH38183	Soybean	extracellular, plasma membrane	31.82	28.77
AT2G18465.1	Thale cress	mitochondrion, nucleus, plastid	27.27	26.87
VIT_04s0044g00490.t01	Wine grape	mitochondrion	28.41	26.32
KRH64103	Soybean	mitochondrion	27.65	24.5
Solyc11g005400.1.1	Tomato	mitochondrion	24.62	23.21
PGSC0003DMT400010185	Potato	mitochondrion	24.24	22.86
Zm00001d021350_P003	Maize	plastid	17.8	18.22

Protein Annotations

EnsemblPlants:Zm00001d035721_P002	EnsemblPlants:Zm00001d035721_T002	EnsemblPlantsGene:Zm00001d035721	EntrezGene:100285325	Gene3D:1.10.287.110	InterPro:DnaJ_domain
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR45376	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ProteinID:AQK79524.1	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI00084417AD	UniProt:A0A1D6LI37	MapMan:35.2	:	:	:

Description

DnaJ domain containing protein

Coordinates

chr6:+:42946898..42949902

Molecular Weight (calculated)

29229.1 Da

IEP (calculated)

9.939

GRAVY (calculated)

-0.794

Length

264 amino acids

Sequence
(BLAST)

001: MLAARRGAAA AWAAQAFHSS SAALSKSTPR FRFTVREKRG DAKSALKNLL LNGGTCQESS NKQMRKQKGG TGSKAQRSAP GKNPCGKNKL YSNLGRKGFV
101: VVVYLDDKNC TLMFNLGGHY WKSFDDDDEC AHTPYGTYGG KKSFTWYWPG EDDGLGSNPS GFQWREESQS AKSKEKFWNE SDVDEDEGSS RDDLRSYRIS
201: LGLPVLGPLK LDHIKAAFRA SALKWHPDKH QGPSQVGVIA EAEEKFRRCV EAYNALTRAF RSSG

Best Arabidopsis Sequence Match ( AT2G18465.1 )
(BLAST)

001: MFRLRSLLSL KSSSIVELSS QNVTEAIRFA PFHSTSVLSE KSRSRFGSAR DSEGERSSKN SSIRFTCTVK EKGRTSAKKT VDKLLFHRGI NDPLQNEWHF
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L763]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.