CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38185	Soybean	cytosol, nucleus	60.59	87.23
KRH67071	Soybean	extracellular, mitochondrion, plastid, vacuole	18.72	54.29
KRH38183	Soybean	extracellular, plasma membrane	77.34	53.77
KRH64103	Soybean	mitochondrion	63.05	42.95
Zm00001d002891_P001	Maize	cytosol	29.56	37.27
VIT_04s0044g00490.t01	Wine grape	mitochondrion	50.74	36.14
GSMUA_Achr8P17360_001	Banana	endoplasmic reticulum, extracellular	35.96	34.76
GSMUA_Achr8P07930_001	Banana	nucleus	35.96	32.59
PGSC0003DMT400010185	Potato	mitochondrion	43.35	31.43
Solyc11g005400.1.1	Tomato	mitochondrion	42.86	31.07
KRH38097	Soybean	cytosol	28.08	30.81
Os05t0106500-01	Rice	mitochondrion	33.99	30.0
KXG21031	Sorghum	plastid	34.48	29.29
Zm00001d035721_P002	Maize	mitochondrion	35.96	27.65
TraesCS1B01G024600.1	Wheat	mitochondrion, plastid	31.53	27.47
TraesCS1D01G020100.1	Wheat	mitochondrion	30.54	26.72
TraesCS2A01G576600.1	Wheat	nucleus	34.98	25.91
TraesCS2B01G610800.1	Wheat	mitochondrion, nucleus	34.48	25.64
TraesCS2D01G587300.1	Wheat	mitochondrion, nucleus	34.48	25.64
Os04t0687300-01	Rice	mitochondrion	34.48	25.55
KXG27496	Sorghum	nucleus	35.96	25.52
AT2G18465.1	Thale cress	mitochondrion, nucleus, plastid	33.5	25.37
KRH71846	Soybean	mitochondrion	29.56	24.9
KRG95387	Soybean	plastid	29.56	23.62
HORVU2Hr1G124560.2	Barley	cytosol, nucleus, plastid	34.48	23.18
HORVU1Hr1G002830.2	Barley	plastid	30.54	22.38
TraesCS1A01G020600.1	Wheat	plastid	30.54	19.08

Protein Annotations

EMBL:ACUP02003487	EnsemblPlants:KRH53847	EnsemblPlantsGene:GLYMA_06G149700	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	ProteinID:KRH53847
ProteinID:KRH53847.1	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0006EDE48E	UniProt:A0A0R0JH39
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:12229378..12233593

Molecular Weight (calculated)

22952.2 Da

IEP (calculated)

6.715

GRAVY (calculated)

-0.934

Length

203 amino acids

Sequence
(BLAST)

001: MTEHLADAKK ALNSLLYNNG VSKFSFEYGY QGSFSNKGQP KSGQHSGGKP QTKTKQTFNE DFDGHPEQIF QATFGNKWYT WSFNNWSGFS SEHSTSGFEW
101: REHSNRTNKW KNESDIEHDD DDDSCVGSCS DRTVLGLPPT GPLKIEDVKN AFQLSALKWH PDKHQGPSQV SLKYSFDQFA MAEEKFKLCV NAYKTLCNAL
201: SPS

Best Arabidopsis Sequence Match ( AT2G18465.1 )
(BLAST)

001: MFRLRSLLSL KSSSIVELSS QNVTEAIRFA PFHSTSVLSE KSRSRFGSAR DSEGERSSKN SSIRFTCTVK EKGRTSAKKT VDKLLFHRGI NDPLQNEWHF
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L763]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.