Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G587300.1 | Wheat | mitochondrion, nucleus | 97.8 | 97.8 |
| TraesCS2A01G576600.1 | Wheat | nucleus | 96.34 | 95.99 |
| HORVU2Hr1G124560.2 | Barley | cytosol, nucleus, plastid | 87.55 | 79.14 |
| Os04t0687300-01 | Rice | mitochondrion | 71.06 | 70.8 |
| KXG27496 | Sorghum | nucleus | 67.77 | 64.69 |
| Zm00001d002891_P001 | Maize | cytosol | 36.26 | 61.49 |
| GSMUA_Achr8P07930_001 | Banana | nucleus | 39.93 | 48.66 |
| KRH38185 | Soybean | cytosol, nucleus | 21.61 | 41.84 |
| TraesCS1B01G024600.1 | Wheat | mitochondrion, plastid | 30.4 | 35.62 |
| KRH53847 | Soybean | nucleus | 25.64 | 34.48 |
| Solyc11g005400.1.1 | Tomato | mitochondrion | 33.7 | 32.86 |
| VIT_04s0044g00490.t01 | Wine grape | mitochondrion | 34.07 | 32.63 |
| PGSC0003DMT400010185 | Potato | mitochondrion | 33.33 | 32.5 |
| KRH38183 | Soybean | extracellular, plasma membrane | 31.87 | 29.79 |
| AT2G18465.1 | Thale cress | mitochondrion, nucleus, plastid | 25.27 | 25.75 |
| TraesCS1B01G262100.2 | Wheat | mitochondrion, nucleus, plastid | 23.81 | 25.19 |
| KRH64103 | Soybean | mitochondrion | 27.47 | 25.17 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G610800.1 | EnsemblPlantsGene:TraesCS2B01G610800 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45376 | PFAM:PF00226 | PFscan:PS50076 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:790440050..790442852
Molecular Weight (calculated)
30948.1 Da
IEP (calculated)
10.222
GRAVY (calculated)
-0.938
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAAASWGKG LPGLRSHLCA AASFHSTPPS PAKWKGKFGC KHEHGERKLS KKYERYVVRQ KRAEGKKALQ NYLLYGKSTP HIEDGSMGSF ANSHDIPRFK
101: TFRKKQDHSS TKPRQGVHHQ RKDKKDKAKF YNFFYETRYV NPENIFETIF GEHHQSFTWS HASWEGFHFR ASSFGFRRAG ESRRQRVESE SEDESDDDDT
201: GETAGVGSHA HRVTLGLPPR GPLTLDDVKT AFRASALRWH PDKHPGSSQA VAEEKFKLCV NAYNSLCAVL KAA
101: TFRKKQDHSS TKPRQGVHHQ RKDKKDKAKF YNFFYETRYV NPENIFETIF GEHHQSFTWS HASWEGFHFR ASSFGFRRAG ESRRQRVESE SEDESDDDDT
201: GETAGVGSHA HRVTLGLPPR GPLTLDDVKT AFRASALRWH PDKHPGSSQA VAEEKFKLCV NAYNSLCAVL KAA
001: MFRLRSLLSL KSSSIVELSS QNVTEAIRFA PFHSTSVLSE KSRSRFGSAR DSEGERSSKN SSIRFTCTVK EKGRTSAKKT VDKLLFHRGI NDPLQNEWHF
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L763]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.