Factsheet for Solyc11g005400.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
extracellular 1
mitochondrion 5
golgi 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010185	Potato	mitochondrion	96.43	96.43
KRH38185	Soybean	cytosol, nucleus	29.64	58.87
VIT_04s0044g00490.t01	Wine grape	mitochondrion	47.5	46.67
KRH53847	Soybean	nucleus	31.07	42.86
KRH38183	Soybean	extracellular, plasma membrane	43.57	41.78
KRH64103	Soybean	mitochondrion	39.64	37.25
AT2G18465.1	Thale cress	mitochondrion, nucleus, plastid	33.57	35.07
GSMUA_Achr8P07930_001	Banana	nucleus	27.5	34.38
TraesCS2D01G587300.1	Wheat	mitochondrion, nucleus	33.21	34.07
TraesCS2B01G610800.1	Wheat	mitochondrion, nucleus	32.86	33.7
TraesCS2A01G576600.1	Wheat	nucleus	32.86	33.58
Os04t0687300-01	Rice	mitochondrion	32.5	33.21
HORVU2Hr1G124560.2	Barley	cytosol, nucleus, plastid	34.29	31.79
Zm00001d002891_P001	Maize	cytosol	18.21	31.68
KXG27496	Sorghum	nucleus	31.43	30.77
Os05t0106500-01	Rice	mitochondrion	25.0	30.43
Solyc03g063350.2.1	Tomato	cytosol	20.36	30.32
GSMUA_Achr8P17360_001	Banana	endoplasmic reticulum, extracellular	22.5	30.0
TraesCS1B01G024600.1	Wheat	mitochondrion, plastid	24.64	29.61
TraesCS1D01G020100.1	Wheat	mitochondrion	23.21	28.02
KXG21031	Sorghum	plastid	23.57	27.62
Zm00001d035721_P002	Maize	mitochondrion	23.21	24.62
HORVU1Hr1G002830.2	Barley	plastid	23.57	23.83
TraesCS1A01G020600.1	Wheat	plastid	23.57	20.31

Protein Annotations

EnsemblPlants:Solyc11g005400.1.1	EnsemblPlantsGene:Solyc11g005400.1	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	SEG:seg	SMART:SM00271
SUPFAM:SSF46565	UniParc:UPI00027697B2	UniProt:K4D4F3	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr11:-:310557..316867

Molecular Weight (calculated)

33182.6 Da

IEP (calculated)

10.079

GRAVY (calculated)

-1.181

Length

280 amino acids

Sequence
(BLAST)

001: MQVIPKWRNV LILKNSLIQS TRIVSSTQSQ NTHLSSFHST SICFEKWKNK WNSDFRGSQQ PTKNYIRYET RQKRADSKKA LKNLLFYGAS GNSFENESST
101: INDRWDMDRD DRSEKKSEYK SAARLRDRSR RRMRKMKKRR LYEEFDEYPE SVFEATFGDK WYTWSFRPGK SSTFEDMFSR RQETDWSEQR HYRWDNETEN
201: ETHTESKYES CHIGSSSERT ILGLPPRGPL KIEDVKNAFR LSALKWHPDK HQGPSQAAAE EKFKTCVTAY KSLCNAFSPA

Best Arabidopsis Sequence Match ( AT2G18465.1 )
(BLAST)

001: MFRLRSLLSL KSSSIVELSS QNVTEAIRFA PFHSTSVLSE KSRSRFGSAR DSEGERSSKN SSIRFTCTVK EKGRTSAKKT VDKLLFHRGI NDPLQNEWHF
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L763]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.