Factsheet for Solyc03g063350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38097	Soybean	cytosol	43.62	44.32
KRG95387	Soybean	plastid	50.0	37.01
GSMUA_Achr11P...	Banana	nucleus	40.43	36.36
KRH71846	Soybean	mitochondrion	45.74	35.68
VIT_08s0007g06530.t01	Wine grape	plastid	47.34	34.1
CDY06886	Canola	mitochondrion, nucleus, plastid	42.02	30.86
Bra007374.1-P	Field mustard	cytosol	28.72	30.68
TraesCS1B01G262100.2	Wheat	mitochondrion, nucleus, plastid	41.49	30.23
AT2G42080.1	Thale cress	mitochondrion, nucleus, plastid	42.02	30.04
TraesCS1D01G251000.1	Wheat	mitochondrion	40.96	29.84
CDX79893	Canola	mitochondrion, nucleus, plastid	39.89	28.96
Os07t0470800-00	Rice	mitochondrion	38.83	28.74
Bra004669.1-P	Field mustard	mitochondrion, nucleus, plastid	39.89	28.63
TraesCS1A01G251500.1	Wheat	mitochondrion, nucleus, plastid	41.49	28.57
HORVU1Hr1G061530.1	Barley	plastid	41.49	28.47
CDY65802	Canola	mitochondrion, nucleus, plastid	39.89	27.68
Zm00001d021350_P003	Maize	plastid	37.23	27.13
KXG36196	Sorghum	plastid	36.17	26.46
AT3G58020.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	35.64	26.38
AT2G42065.1	Thale cress	plastid	27.13	24.29
CDY06058	Canola	plastid	31.91	23.35
CDX71980	Canola	plastid	25.0	20.8
Solyc11g005400.1.1	Tomato	mitochondrion	30.32	20.36
CDY14812	Canola	mitochondrion, nucleus, plastid	42.02	13.91
Bra016896.1-P	Field mustard	mitochondrion, nucleus, plastid	17.02	6.17

Protein Annotations

EnsemblPlants:Solyc03g063350.2.1	EnsemblPlantsGene:Solyc03g063350.2	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625	SEG:seg
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000276764A	UniProt:K4BH81	MapMan:35.2	:

Description

No Description!

Coordinates

chr3:-:34389389..34394653

Molecular Weight (calculated)

21995.7 Da

IEP (calculated)

5.586

GRAVY (calculated)

-1.100

Length

188 amino acids

Sequence
(BLAST)

001: MDLLNSFSSW QHDRDEYDPS SSRDSSWFRR DFRASGHKGG RSKNTGQHQH RVFQFLEEED IEIETFFGST FGGNRYYHWS FINEEPQWRN SSNYSNSRQW
101: SWRNQYSDYD ESTDSENSES DLSSERLTLG LNAFGPLNLE DIKNAYRVCA LKWHPDRHQG SSKVVAEEKF KACSAAYQCL CDKLGVSQ

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.