CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021350_P003	Maize	plastid	88.33	87.98
Os07t0470800-00	Rice	mitochondrion	73.93	74.8
TraesCS1B01G262100.2	Wheat	mitochondrion, nucleus, plastid	70.04	69.77
TraesCS1D01G251000.1	Wheat	mitochondrion	69.65	69.38
HORVU1Hr1G061530.1	Barley	plastid	70.43	66.06
TraesCS1A01G251500.1	Wheat	mitochondrion, nucleus, plastid	70.04	65.93
GSMUA_Achr11P...	Banana	nucleus	34.63	42.58
VIT_08s0007g06530.t01	Wine grape	plastid	40.86	40.23
KRH38097	Soybean	cytosol	26.46	36.76
KRG95387	Soybean	plastid	36.19	36.61
KRH71846	Soybean	mitochondrion	34.24	36.51
Solyc03g063350.2.1	Tomato	cytosol	26.46	36.17
AT2G42080.1	Thale cress	mitochondrion, nucleus, plastid	34.63	33.84
Bra004669.1-P	Field mustard	mitochondrion, nucleus, plastid	34.24	33.59
CDX71980	Canola	plastid	28.79	32.74
CDY06058	Canola	plastid	32.68	32.68
CDX79893	Canola	mitochondrion, nucleus, plastid	32.68	32.43
CDY06886	Canola	mitochondrion, nucleus, plastid	32.3	32.42
AT3G58020.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	31.91	32.28
Bra007374.1-P	Field mustard	cytosol	21.4	31.25
CDY65802	Canola	mitochondrion, nucleus, plastid	32.68	31.0
AT2G42065.1	Thale cress	plastid	24.51	30.0
KXG27496	Sorghum	nucleus	25.29	22.73
KXG21031	Sorghum	plastid	18.68	20.08
CDY14812	Canola	mitochondrion, nucleus, plastid	33.85	15.32
Bra016896.1-P	Field mustard	mitochondrion, nucleus, plastid	17.51	8.67

Protein Annotations

EnsemblPlants:KXG36196	EnsemblPlantsGene:SORBI_3002G298900	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625	ProteinID:KXG36196
ProteinID:KXG36196.1	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI00081AC8EB	UniProt:A0A1B6QE44
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:67455335..67459697

Molecular Weight (calculated)

29879.2 Da

IEP (calculated)

9.868

GRAVY (calculated)

-1.120

Length

257 amino acids

Sequence
(BLAST)

001: MNSIKSALFS GHRSHPLAAA AAVSQQQLGG AAPFHSTPVL QRKRKTQWHN RFNYYTRRRK NRETKRSMLR NMSEYAEYLF QSWRDEDEKN DASSGPSWFR
101: GHRWVRNSNN GFRTHDFYSG NFRSKGGFDF CTSDEDEPEN LFRNVFQDQH TYYWSFSSDN YQRNFRRARS EKSRNWSSET DEEDEVPAPS EVSLARQTLG
201: LRTSGPLKLE DVKSAYRACA LRWHPDRHNG SSKAAAEEKF KHCSAAYKTL CDSFAAA

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.