Factsheet for TraesCS1D01G251000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G262100.2	Wheat	mitochondrion, nucleus, plastid	97.29	97.29
TraesCS1A01G251500.1	Wheat	mitochondrion, nucleus, plastid	98.45	93.04
HORVU1Hr1G061530.1	Barley	plastid	92.64	87.23
Os07t0470800-00	Rice	mitochondrion	75.97	77.17
Zm00001d021350_P003	Maize	plastid	71.32	71.32
KXG36196	Sorghum	plastid	69.38	69.65
GSMUA_Achr11P...	Banana	nucleus	36.43	44.98
VIT_08s0007g06530.t01	Wine grape	plastid	43.41	42.91
Solyc03g063350.2.1	Tomato	cytosol	29.84	40.96
KRH71846	Soybean	mitochondrion	37.98	40.66
KRG95387	Soybean	plastid	39.15	39.76
KRH38097	Soybean	cytosol	28.29	39.46
AT2G42080.1	Thale cress	mitochondrion, nucleus, plastid	36.05	35.36
Bra004669.1-P	Field mustard	mitochondrion, nucleus, plastid	35.66	35.11
CDY06886	Canola	mitochondrion, nucleus, plastid	33.33	33.59
CDY65802	Canola	mitochondrion, nucleus, plastid	35.27	33.58
CDX79893	Canola	mitochondrion, nucleus, plastid	33.33	33.2
AT3G58020.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	32.17	32.68
CDY06058	Canola	plastid	32.17	32.3
CDX71980	Canola	plastid	26.74	30.53
Bra007374.1-P	Field mustard	cytosol	19.77	28.98
AT2G42065.1	Thale cress	plastid	23.26	28.57
TraesCS2D01G587300.1	Wheat	mitochondrion, nucleus	24.81	23.44
TraesCS1D01G020100.1	Wheat	mitochondrion	18.22	20.26
CDY14812	Canola	mitochondrion, nucleus, plastid	34.88	15.85
Bra016896.1-P	Field mustard	mitochondrion, nucleus, plastid	18.22	9.06

Protein Annotations

EnsemblPlants:TraesCS1D01G251000.1	EnsemblPlantsGene:TraesCS1D01G251000	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625	SEG:seg
SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr1D:-:343349217..343357097

Molecular Weight (calculated)

30002.3 Da

IEP (calculated)

9.513

GRAVY (calculated)

-1.147

Length

258 amino acids

Sequence
(BLAST)

001: MNHVKSALLS GHRPHRLAAA APQQLAATAS FHSTPPLQRK RKTQWQHRFN FYAKRRRNRD TKRTMIRNMS EYAEQLFNSW RDEDEKKDAS SGPSWFRGHR
101: WVRDSRNNGF RSHEFYYDTV KSRGGFEFCT SDDDDEPETV FRNAFRGNQH TYYWSFESDD FPRRNSRRSH SESSGHWSYE TDDEGEISTQ TEVSVACKAL
201: GLSTSGPLKL EDVKSAYRTC ALRWHPDRHH GSSKATAEEK FKRCSAAYQT LCDSLATA

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.