Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71980 | Canola | plastid | 69.65 | 79.2 |
| AT3G58020.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 60.31 | 61.02 |
| Bra007374.1-P | Field mustard | cytosol | 33.46 | 48.86 |
| CDY06886 | Canola | mitochondrion, nucleus, plastid | 41.63 | 41.8 |
| CDY65802 | Canola | mitochondrion, nucleus, plastid | 42.02 | 39.85 |
| CDX79893 | Canola | mitochondrion, nucleus, plastid | 39.3 | 39.0 |
| VIT_08s0007g06530.t01 | Wine grape | plastid | 38.91 | 38.31 |
| KRG95387 | Soybean | plastid | 37.35 | 37.8 |
| KRH71846 | Soybean | mitochondrion | 34.63 | 36.93 |
| KRH38097 | Soybean | cytosol | 23.74 | 32.97 |
| KXG36196 | Sorghum | plastid | 32.68 | 32.68 |
| Os07t0470800-00 | Rice | mitochondrion | 32.3 | 32.68 |
| GSMUA_Achr11P... | Banana | nucleus | 26.46 | 32.54 |
| TraesCS1B01G262100.2 | Wheat | mitochondrion, nucleus, plastid | 32.3 | 32.17 |
| TraesCS1D01G251000.1 | Wheat | mitochondrion | 32.3 | 32.17 |
| Solyc03g063350.2.1 | Tomato | cytosol | 23.35 | 31.91 |
| Zm00001d021350_P003 | Maize | plastid | 31.91 | 31.78 |
| TraesCS1A01G251500.1 | Wheat | mitochondrion, nucleus, plastid | 32.3 | 30.4 |
| HORVU1Hr1G061530.1 | Barley | plastid | 31.91 | 29.93 |
| CDY14812 | Canola | mitochondrion, nucleus, plastid | 42.02 | 19.01 |
Protein Annotations
| EnsemblPlants:CDY06058 | EnsemblPlantsGene:GSBRNA2T00121918001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR45376 | PFAM:PF00226 | PFscan:PS50076 | ProteinID:CDY06058 |
| ProteinID:CDY06058.1 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EF2AE2 | MapMan:35.2 |
Description
BnaA09g37220D
Coordinates
chrLK031967:-:527613..528903
Molecular Weight (calculated)
30045.9 Da
IEP (calculated)
8.719
GRAVY (calculated)
-1.000
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MIAAVRAAIL KPQGCSSNVK TALLFHSTPI LQRKHKSNSE TRNKKLSRSR AKQDLRRNVN AFAEHLFGIW SDGFDYSDKR TSWFEKQYFR VCKRNRTGSR
101: YIHQRLDKSC FDFSGVDDEC EIEYFLRSAL GASYKERKSR WRACHFYGSN RQEEGEAHSW SWRQRVDQEE EKEEEEEDKH SSTEVNDLDS SEQSHRKTLG
201: LSSSGPLTLR DVKNAYRVCA LKWHPDLHHD STKDAAEEKF KLCSVAYESL CEKFAMK
101: YIHQRLDKSC FDFSGVDDEC EIEYFLRSAL GASYKERKSR WRACHFYGSN RQEEGEAHSW SWRQRVDQEE EKEEEEEDKH SSTEVNDLDS SEQSHRKTLG
201: LSSSGPLTLR DVKNAYRVCA LKWHPDLHHD STKDAAEEKF KLCSVAYESL CEKFAMK
001: MMAAIRAAIL KPQDYYSHLK TALFHSTPIL QRKHQSNSKA RSKRFGRKKA KQDLRRNVNA FAQHLFGIWS DGFDYSGKHT SWFEKQYSRV SKRNRNGKTH
101: IPQHLDKRCF DFSEVDEGYQ IEYFLKTALG GSRGFSWSNT REGGTRSGRY SNNFRKSWGS RYRLDEEEEE EEEEYEYSST GVSDTEPNQE SHRQTLGLSS
201: SGPLNLEDVK IAYRACALKW HPDRHHTSTK NEAEEKFKLC TVAYQSLCEK LAMN
101: IPQHLDKRCF DFSEVDEGYQ IEYFLKTALG GSRGFSWSNT REGGTRSGRY SNNFRKSWGS RYRLDEEEEE EEEEYEYSST GVSDTEPNQE SHRQTLGLSS
201: SGPLNLEDVK IAYRACALKW HPDRHHTSTK NEAEEKFKLC TVAYQSLCEK LAMN
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RXJ5]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.