CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
mitochondrion 1
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67071	Soybean	extracellular, mitochondrion, plastid, vacuole	22.05	80.0
KRH71846	Soybean	mitochondrion	58.66	61.83
KRH38097	Soybean	cytosol	44.49	61.08
VIT_08s0007g06530.t01	Wine grape	plastid	55.91	54.41
Solyc03g063350.2.1	Tomato	cytosol	37.01	50.0
AT2G42080.1	Thale cress	mitochondrion, nucleus, plastid	45.67	44.11
GSMUA_Achr11P...	Banana	nucleus	36.22	44.02
CDY06886	Canola	mitochondrion, nucleus, plastid	44.09	43.75
Bra004669.1-P	Field mustard	mitochondrion, nucleus, plastid	44.88	43.51
CDY65802	Canola	mitochondrion, nucleus, plastid	45.28	42.44
CDX79893	Canola	mitochondrion, nucleus, plastid	42.91	42.08
TraesCS1B01G262100.2	Wheat	mitochondrion, nucleus, plastid	40.16	39.53
TraesCS1D01G251000.1	Wheat	mitochondrion	39.76	39.15
HORVU1Hr1G061530.1	Barley	plastid	42.13	39.05
Os07t0470800-00	Rice	mitochondrion	38.98	38.98
KRH38185	Soybean	cytosol, nucleus	21.26	38.3
Zm00001d021350_P003	Maize	plastid	38.19	37.6
TraesCS1A01G251500.1	Wheat	mitochondrion, nucleus, plastid	40.16	37.36
CDY06058	Canola	plastid	37.8	37.35
AT3G58020.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	36.61	36.61
KXG36196	Sorghum	plastid	36.61	36.19
Bra007374.1-P	Field mustard	cytosol	24.41	35.23
CDX71980	Canola	plastid	31.1	34.96
AT2G42065.1	Thale cress	plastid	25.59	30.95
KRH53847	Soybean	nucleus	23.62	29.56
KRH38183	Soybean	extracellular, plasma membrane	29.13	25.34
KRH64103	Soybean	mitochondrion	24.02	20.47
CDY14812	Canola	mitochondrion, nucleus, plastid	42.91	19.19
Bra016896.1-P	Field mustard	mitochondrion, nucleus, plastid	24.41	11.95

Protein Annotations

EMBL:ACUP02012105	EMBL:BT094143	EnsemblPlants:KRG95387	EnsemblPlantsGene:GLYMA_19G148000	EntrezGene:100807880	Gene3D:1.10.287.110
InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ProteinID:KRG95387	ProteinID:KRG95387.1	SEG:seg	SMART:SM00271
SUPFAM:SSF46565	UniParc:UPI0001B15B96	UniProt:C6T9H2	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr19:+:40867576..40871815

Molecular Weight (calculated)

29546.8 Da

IEP (calculated)

9.897

GRAVY (calculated)

-1.061

Length

254 amino acids

Sequence
(BLAST)

001: MNSAIFKASN SNNLHSSLRA ALFHSTSPLQ RKRRNHWDSR GSNHTSRRFR RVQAKHRVMN SINDYAESLF QSWKQGIDRD DPSSSRGTSW FKKQYSDGAS
101: GRYRNSNKGS SHRYRRDPSF CEDDFDVETI LRSAFGGNRF FYWSFINEEN PQWRRSERFS NFEKSWSWRY RNENDYDSSS ESDSLDSDLV SDRLALGLSA
201: SGSLKLEDVK NAYRVCALKW HPDRHQGSSK AIAEEKFKLC SAAYQSLCDK LALD

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.