Factsheet for GSMUA_Achr11P16870_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
cytosol 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g063350.2.1	Tomato	cytosol	36.36	40.43
KRH38097	Soybean	cytosol	33.97	38.38
Os07t0470800-00	Rice	mitochondrion	46.41	38.19
TraesCS1B01G262100.2	Wheat	mitochondrion, nucleus, plastid	46.41	37.6
TraesCS1D01G251000.1	Wheat	mitochondrion	44.98	36.43
KRG95387	Soybean	plastid	44.02	36.22
VIT_08s0007g06530.t01	Wine grape	plastid	44.98	36.02
KRH71846	Soybean	mitochondrion	41.15	35.68
Zm00001d021350_P003	Maize	plastid	43.54	35.27
TraesCS1A01G251500.1	Wheat	mitochondrion, nucleus, plastid	45.93	35.16
HORVU1Hr1G061530.1	Barley	plastid	45.45	34.67
KXG36196	Sorghum	plastid	42.58	34.63
CDY65802	Canola	mitochondrion, nucleus, plastid	41.63	32.1
Bra004669.1-P	Field mustard	mitochondrion, nucleus, plastid	38.76	30.92
CDX79893	Canola	mitochondrion, nucleus, plastid	38.28	30.89
AT2G42080.1	Thale cress	mitochondrion, nucleus, plastid	38.76	30.8
CDY06886	Canola	mitochondrion, nucleus, plastid	36.84	30.08
AT3G58020.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	33.49	27.56
CDY06058	Canola	plastid	32.54	26.46
GSMUA_Achr8P17360_001	Banana	endoplasmic reticulum, extracellular	26.32	26.19
Bra007374.1-P	Field mustard	cytosol	22.01	26.14
GSMUA_Achr8P07930_001	Banana	nucleus	24.88	23.21
CDX71980	Canola	plastid	23.92	22.12
AT2G42065.1	Thale cress	plastid	22.01	21.9
CDY14812	Canola	mitochondrion, nucleus, plastid	37.32	13.73
Bra016896.1-P	Field mustard	mitochondrion, nucleus, plastid	16.75	6.74

Protein Annotations

EnsemblPlants:GSMUA_Achr11P16870_001	EnsemblPlants:GSMUA_Achr11T16870_001	EnsemblPlantsGene:GSMUA_Achr11G16870_001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002948081	UniProt:M0RSW7	MapMan:35.2

Description

heat shock protein DnaJ, putative [Source:GMGC_GENE;Acc:GSMUA_Achr11G16870_001]

Coordinates

chr11:-:18571272..18578462

Molecular Weight (calculated)

24581.8 Da

IEP (calculated)

6.508

GRAVY (calculated)

-1.154

Length

209 amino acids

Sequence
(BLAST)

001: MESKRTQVRN LSDYAEYLFQ SWRDEVEQNS STRETPWFRR HYWAMGAKKN GYPDPLWESN SNKKKRVFEF YQSDDDDDDD DVETIFHSAF GGTRFSYWSF
101: HSSQDSHWSH SGHTSHKSRN WTYETDDEND YSAQPEFTSE RLALGLRAFG PLNIEEVKRA YRTCALKWHP DRHQGSSKEA AEEKFKHCSA AYKTLCNKLA
201: IGECSVRSC

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.