Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002891_P001 | Maize | cytosol | 33.04 | 45.96 |
| KRH38185 | Soybean | cytosol, nucleus | 27.23 | 43.26 |
| TraesCS2D01G587300.1 | Wheat | mitochondrion, nucleus | 49.11 | 40.29 |
| GSMUA_Achr8P17360_001 | Banana | endoplasmic reticulum, extracellular | 37.5 | 40.0 |
| TraesCS2B01G610800.1 | Wheat | mitochondrion, nucleus | 48.66 | 39.93 |
| TraesCS2A01G576600.1 | Wheat | nucleus | 48.66 | 39.78 |
| KXG27496 | Sorghum | nucleus | 48.21 | 37.76 |
| Os04t0687300-01 | Rice | mitochondrion | 45.54 | 37.23 |
| KRH53847 | Soybean | nucleus | 32.59 | 35.96 |
| HORVU2Hr1G124560.2 | Barley | cytosol, nucleus, plastid | 47.32 | 35.1 |
| Solyc11g005400.1.1 | Tomato | mitochondrion | 34.38 | 27.5 |
| VIT_04s0044g00490.t01 | Wine grape | mitochondrion | 34.82 | 27.37 |
| PGSC0003DMT400010185 | Potato | mitochondrion | 33.93 | 27.14 |
| KRH38183 | Soybean | extracellular, plasma membrane | 34.82 | 26.71 |
| AT2G18465.1 | Thale cress | mitochondrion, nucleus, plastid | 30.36 | 25.37 |
| GSMUA_Achr11P... | Banana | nucleus | 23.21 | 24.88 |
| KRH64103 | Soybean | mitochondrion | 29.46 | 22.15 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P07930_001 | EnsemblPlants:GSMUA_Achr8T07930_001 | EnsemblPlantsGene:GSMUA_Achr8G07930_001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR45376 | PFAM:PF00226 | PFscan:PS50076 | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI000296DBE5 | UniProt:M0TNJ6 | MapMan:35.2 | : | : |
Description
heat shock protein DnaJ, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G07930_001]
Coordinates
chr8:-:5285244..5288806
Molecular Weight (calculated)
25627.8 Da
IEP (calculated)
9.517
GRAVY (calculated)
-0.944
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVLTPDFGQ TYVRYAVRQK RAEIKKALKD YLLYGKPSKQ NCQDRDIHGF DDTSISRNFG KAKFHSSSSH GKCNHGSKRN RQKKNSSNDE DSYDNPETIY
101: ETVFGGHRGF TWSFESWARC HFSKSGTQFE WKNESRWEKT RSRVWSESDD EDNLTDVGSH SHRVALGLPP TGPLKLDDVK SAFRISALKW HPDKHQGPSQ
201: VMAAEKFKLC VDAYNSICSV LKAT
101: ETVFGGHRGF TWSFESWARC HFSKSGTQFE WKNESRWEKT RSRVWSESDD EDNLTDVGSH SHRVALGLPP TGPLKLDDVK SAFRISALKW HPDKHQGPSQ
201: VMAAEKFKLC VDAYNSICSV LKAT
001: MFRLRSLLSL KSSSIVELSS QNVTEAIRFA PFHSTSVLSE KSRSRFGSAR DSEGERSSKN SSIRFTCTVK EKGRTSAKKT VDKLLFHRGI NDPLQNEWHF
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L763]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.