Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 6
- extracellular 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38185 | Soybean | cytosol, nucleus | 33.81 | 50.35 |
| GSMUA_Achr8P07930_001 | Banana | nucleus | 40.0 | 37.5 |
| KRH53847 | Soybean | nucleus | 34.76 | 35.96 |
| Os05t0106500-01 | Rice | mitochondrion | 36.67 | 33.48 |
| KXG21031 | Sorghum | plastid | 36.19 | 31.8 |
| TraesCS1B01G024600.1 | Wheat | mitochondrion, plastid | 33.81 | 30.47 |
| TraesCS1D01G020100.1 | Wheat | mitochondrion | 33.33 | 30.17 |
| Zm00001d035721_P002 | Maize | mitochondrion | 36.19 | 28.79 |
| HORVU1Hr1G002830.2 | Barley | plastid | 36.19 | 27.44 |
| GSMUA_Achr11P... | Banana | nucleus | 26.19 | 26.32 |
| KRH38183 | Soybean | extracellular, plasma membrane | 36.19 | 26.03 |
| VIT_04s0044g00490.t01 | Wine grape | mitochondrion | 33.33 | 24.56 |
| Solyc11g005400.1.1 | Tomato | mitochondrion | 30.0 | 22.5 |
| TraesCS1A01G020600.1 | Wheat | plastid | 34.76 | 22.46 |
| PGSC0003DMT400010185 | Potato | mitochondrion | 29.52 | 22.14 |
| AT2G18465.1 | Thale cress | mitochondrion, nucleus, plastid | 27.14 | 21.27 |
| KRH64103 | Soybean | mitochondrion | 29.05 | 20.47 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P17360_001 | EnsemblPlants:GSMUA_Achr8T17360_001 | EnsemblPlantsGene:GSMUA_Achr8G17360_001 | Gene3D:1.10.287.110 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR45376 |
| PFAM:PF00226 | PFscan:PS50076 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | TMHMM:TMhelix |
| UniParc:UPI0002955CFF | UniProt:M0TR89 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G17360_001]
Coordinates
chr8:+:16874827..16882393
Molecular Weight (calculated)
24069.7 Da
IEP (calculated)
8.496
GRAVY (calculated)
-0.439
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLPSTMLLV FTIINGIRFS CLNLIWPSLL YQMLVEKLNV KVSLRKVIFK LLSSNLKIAR CQGRKNGQSF DDEDDDCGHP KTKFSASFGG QRCFTWSFNS
101: QDRLHFENFT NGFEWRDHSQ QAKARTRVWS ESDIEEEDES NDIGLQSHRF ALGLPLVGPL KLDDVKCAFR SSALKWHPDK HEGTSQAVAE EKFKLCVEAY
201: KTLCKSLKSS
101: QDRLHFENFT NGFEWRDHSQ QAKARTRVWS ESDIEEEDES NDIGLQSHRF ALGLPLVGPL KLDDVKCAFR SSALKWHPDK HEGTSQAVAE EKFKLCVEAY
201: KTLCKSLKSS
001: MFRLRSLLSL KSSSIVELSS QNVTEAIRFA PFHSTSVLSE KSRSRFGSAR DSEGERSSKN SSIRFTCTVK EKGRTSAKKT VDKLLFHRGI NDPLQNEWHF
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L763]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.